TABLE 1.

PCR amplification and sequencing primers

ORF	Amplification primers		Sequencing primer(s)
	Name	Sequence (5′-3′)	Name	Sequence (5′-3′)
8	8f	AATTATTGGTGGGCAGAACC	8s	CCATCACCACGCTATTCTC
	8r	TTCTCCAGCACAGCAACG
11	11f	CTGTAACGATGCTAACGCTACG	11sf1	TAGCCCAAACGACGACAAAG
	11r	TTCAGAAACCTGTCCAGGTCC
15	15f	CAAAGCGCAAAGCAAAATGC	15sf1	ATCCAACACACGCAACATC
	15r	GGGCCTTGTAGATCAGCTCTCC
30	30f1	GCGCTACTTCTGAAAACG	30-1s	TACCCAAGCATTATCCAG
	30r1	CCACAAACTTGATAAACACG	30-1sr1	GATAACCCTGACGGAGTAAG
	30f2	AAACCACAAGCCTTACTCC	30-2s	GAGAAGACCTTTCAGCGAC
	30r2	GCGCAACTATCACATACG	30-2sr1	CTCAGCAGTCATAACGAAC
31	31f	GGACTTACCGTCGAACAGACC	31sr1	GGAGACAGGTTGAGAGAAG
	31r	ACCCAGTACGTAGCCATGAAGC	31sr	CAGCCTCGCAAGCGCGGGTGAGGT
32	32f	TGATTACTACTACCCCCCTCC	32sf1	TATTTCTGACACCCACCAC
	32r	AGCCAGATTCACGTCATCC
37	37f	ACATACTCCGCCATCTCC	37s	CCATCTATAACGCCAGCC
	37r	ACAGCTACATGACTCGTGC
40	40f	ATCACAAACGCATCCTCG	40s	ACTCGCCGAATCCCAGATG
	40r	CACAGCTCACCCAAAATACC
42	42f1	ATCCCAGCGCAACTCTTAC	42fs1	GGCAAGTATAACCTGAACGG
	42r1	GTCCGTAGAGCTGAGTAGAG	42rs1	TGAAACAGCGAACACGGGTC
45	45f	TGGCACGAAAGCACTACG	45sr1	TGATCTATCAGAGCCAAC
	45r	AAACCTGCACGAATGTTGG
50	50f	ACTCGACTCAGACTACATTGG	50sr1	GCTCACTAAATAGCCAAAC
	50r	ATAGCAGAATGGGGATAGC
52	52f	CCAACAGCTTTCACATCACC	52s	GCTACTTCGTTCACTTCC
	52r	TTCAAATTCCTCGCTCACC
57	57f1	GGTGCTGAACGTAAACCTG	57fs1	CGTAAACCTGAGCGAG
	57r1	CTCAGGGCTGCTAATATATGC	57rs1	GTAGAAACCTTGACGACACGG
67	67f	CAAAACTCCAACACCACG	67s	GAAGAAGCATTCGCCAAG
	67r	GAGAAGAGGTTCTACAAGCAGC
68	68f	AGCATTGCCAAACAGTTCC	68s1	GAAGATAGAATGGGTGTGAG
	68r	CAAGAAACCACTGCTCAACC	68s3	ACCGTTGAGCATAATCATCC
			68r2	GTCCCCTACCTTTTAACG
			68r3	CGGCGGCCGTGGACCGA
73	73f	GAACATATGAGCATGTACC	73s	ACGGACAACGCTTACCCAC
	73r	GACCAGTAGAACATCTTCC