Table 1.

SNPs employed to test the BCGA using TaqMan real-time PCR

Polymorphism	dbSNP ID	Location	Chromosome	Chromosome position (bp)	Allele	Allelic frequency
ApoE −219	rs405509	Promoter	19	50100676	T	0.51
					G	0.49
IL-1 alpha −889	rs1800587	Promoter	2	113259191	C	0.70
					T	0.30
IL-1 beta −511	rs16944	Promoter	2	113311098	G	0.53
					A	0.47
IL-6 −174	rs1800795	Promoter	7	22539885	G	0.77
					C	0.23
TNF alpha −238	rs361525	Promoter	6	31651080	G	0.92
					A	0.08
TNF alpha −308	rs1800629	Promoter	6	31651010	G	0.91
					A	0.09
IFN-γ	rs2069727	(3′-UTR)	12	66834490	A	0.68
					G	0.32
CST3	rs2424574	Intron	20	23556980	C	0.51
					T	0.49
CACNA1D	rs723540	Intron	3	53730993	G	0.60
					C	0.40
AHRGEF3a	rs1500711	Intergenic region	3	56889194	T	0.66
					C	0.34
SERPINA3	rs4934	Coding region	14	94150556	G	0.54
					A	0.46
TF	rs3811656	Coding region	3	134957026	G	0.70
					A	0.30
LRRC2	rs1402152	Intron	3	46549422	T	0.67
					C	0.33

Data are from dbSNP database (http://www.ncbi.nih.gov/SNP).

^aSince this SNP is intergenic, the closest gene in indicated.