TABLE 3.
Results of pairwise HKA tests betweenfw and 10 neutral loci
| Population | Significant comparisons with fw |
Total significant comparisons |
P |
|---|---|---|---|
| CH | 0 | 4 | 1 |
| PUR | 5 | 5 | 7.2E-05 |
| BBS | 4 | 4 | 0.00062 |
| KATH | 10 | 10 | 3.4E-11 |
| MAN | 9 | 16 | 1.6E-05 |
| CNX | 1 | 1 | 0.18 |
| BKK | 2 | 3 | 0.08 |
| KK | 2 | 2 | 0.0303 |
| BOG | 0 | 0 | 1 |
| DAR | 3 | 3 | 0.00457 |
| CEB | 4 | 4 | 0.00062 |
| MNL | 1 | 1 | 0.18 |
| KMJ | 7 | 9 | 1.9E-05 |
The HKA test was performed for all pairwise comparisons between loci [11 loci (fw + 10 neutral loci) → 55 comparisons], for each of the 13 sampled populations. For each population, the probability of observing at least i significant tests at the fw locus given that n paired tests were performed and k were significant between the l loci was calculated using Equation 1 (see materials and methods). Populations in italics indicate that the number of comparisons deviating from the neutral expectation was significantly higher than expected for this population.