TABLE 2.
Nucleotide identity (whole sequence) and synonymous site divergence (in coding regions) betweenP. viridiflava and threeP. syringae pathovars averaged over allP. viridiflava isolates
| % average pairwise identity |
% average synonymous site divergence (JC-corrected) |
||||||
|---|---|---|---|---|---|---|---|
| Fragment | Coding sites in P. virdiflava fragment |
Pph | Psy | Pto | Pph | Psy | Pto |
| 7 | 98% (9–395) | 85.0 | 84.7 | 86.1 | 52.1 (89.0) | 52.1 (89.0) | 46.6 (72.7) |
| 17 | 0 | 79.5 | 76.7 | 78.9 | — | — | — |
| 20 | 100% (1–372) | 92.1 | 91.5 | 91.0 | 30.1 (38.4) | 36.1 (49.3) | 36.1 (49.2) |
| 26 | 77% (1–234; 337–442) | 88.2 | 85.7 | 88.4 | 39.4 (55.8) | 43.9 (66.0) | 38.4 (53.9) |
| gyrB | 100% (1–741) | 89.7 | 90.1 | 89.9 | 42.3 (62.3) | 39.8 (56.7) | 40.7 (58.6) |