TABLE 1.
ChIP analysis using a subset of differentially expressed genes detected between Ws andathd1-t1 lines
| Acetylation or methylation profile
|
|||||||
|---|---|---|---|---|---|---|---|
| Locus ID | Description | H4- tetraAc |
H4- K12Ac |
H3- K9Ac |
H3- K9Me |
Tissue | Expression |
| At1g14970 | Putative auxin-independent promoter (AXI) | 0 | 0 | ++ | 0 | Leaf | ++ |
| At2g3691 | A. thaliana P glycoprotein (PGP1) | 0 | ++ | 0 | ND | Leaf | ++ |
| At2g2819 | Putative copper/zinc superoxide dismutase (CSD2) | 0 | ++ | 0 | 0 | Leaf | ++ |
| At3g23130 | Superman | 0 | 0 | 0 | ND | Leaf | ++ |
| At1g02920 | Glutathione S-transferase (GST11) | 0 | 0 | 0 | 0 | Leaf | — |
| At4g34590 | BZip transcription factor | 0 | ND | ++ | — | Flower | ++ |
| At1g01060 | Late elongated hypocotyls protein (LHY) | ++ | ND | ++ | ND | Flower | ++ |
| At2g02850 | Plantacyanin (ARPN) | ++ | ND | ++ | ND | Flower | ++ |
| At2g22980 | Putative serine carboxypeptide I (SCP) | 0 | ND | 0 | 0 | Flower | — |
0 indicates a small or no difference between Ws and athd1-t1; ++, increased level of histone acetylation or gene expression; —, decreased level of histone acetylation, methylation, or gene expression; ND, not determined.