TABLE 3.
Enzyme | Origin | Groupg | Length (amino acids) | Molecular mass (kDa)a | Putative active-site residue
|
Expression level (% of total protein) | pNSO (compound 5) parameters
|
pNPGE (compound 10) parameters
|
|||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Nucleophile | Histidine | Acid | Tyrosine(s) | Activity (U mg−1) | Ed,f | Activity (U mg−1) | Ed,f | ||||||
AraEchAb | Agrobacterium radiobacter AD1 | 7 | 294 | 34.1 | D107 | H275 | D246 | Y152, Y215 | 41 | 1.0 | 56 (R) | 4.0 | 3.4 (S) |
Bsuehc | Bacillus subtilis | 2 | 286 | 32.8 | D103 | H265 | D237 | Y150, Y210 | 17 | <0.002e | — | 0.15 | 22 (R) |
Bfueh1b | Burkholderia fungorum LB400 | 5 | 396 | 44.2 | D182 | H360 | E333 | Y239, Y308 | 29 | 0.16 | 45 (R) | 0.80 | 5.3 (R) |
Corehc | Corynebacterium sp. strain C12 | 6 | 286 | 32.1 | D99 | H264 | D123 | Y167, Y209 | 19 | 0.67 | 24 (R) | <0.002 | — |
Draehc | Deinococcus radiodurans R1 | 2 | 278 | 31.4 | D104 | H259 | D231 | Y150, Y205 | 36 | 0.11 | 21 (S) | 0.75 | 1.8 (R) |
MtuEphFb | Mycobacterium tuberculosis H37v | 300 | 33.8 | D108 | H274 | D246 | Y153, Y213 | 13 | <0.002 | — | <0.002 | — | |
Npuch1c | Nostoc punctiforme | 2 | 289 | 33.4 | D104 | H267 | D239 | Y150, Y211 | 55 | 1.3 | 20 (S) | 1.3 | 16 (R) |
Npueh2b | Nostoc punctiforme | 4 | 300 | 34.7 | D112 | H273 | D246 | Y154, Y217 | 39 | <0.002 | — | 0.003 | — |
Ppuehb | Pseudomonas putida KT2440 | 4 | 299 | 34.3 | D107 | H267 | D239 | Y213 | 12 | <0.002 | — | <0.002 | — |
Rpach2b | Rhodopseudomonas palustris CGA009 | 8 | 316 | 34.7 | D100 | H294 | D261 | Y148, Y231 | 49 | 1.1 | 2.6 (R) | 36 | 2.2 (S) |
Scoeh6b | Streptomyces coelicolor A3(2) | 6 | 292 | 32.1 | D103 | H270 | E127 | Y158, Y215 | 57 | <0.002 | — | <0.002 | — |
Tfuehb | Thermobifida fusca | 5 | 393 | 43.3 | D183 | H366 | D341 | Y245, Y316 | 11 | <0.002 | — | <0.002 | — |
Molecular masses are for the EH segment of the fusion protein.
Initial activities were determined spectrophotometrically at a 0.5 mM substrate concentration with CFEs.
Initial activities were determined spectrophotometrically with (partially) purified protein.
The enantiomer that is preferentially hydrolyzed is indicated in parentheses.
Activity below the detection limit (0.002 U mg−1).
—, Activity too low for determination of an accurate E value.
See Fig. 3.