TABLE 1.
Acph-1 | rp49 | S25 | P22 | P154 | P2 | S1 | P21 | Concatenated dataa |
|
---|---|---|---|---|---|---|---|---|---|
Shared | 19 | 12 | 22 | 6 | 4 | 2 | 6 | 3 | 62 |
Fixed | 3 | 2 | 0 | 9 | 10 | 3 | 5 | 4 | 34 |
SX1 | 73 | 34 | 36 | 32 | 39 | 50 | 12 | 27 | 269 |
SX2 | 72 | 44 | 73 | 64 | 52 | 69 | 28 | 56 | 414 |
DXY | 0.0191 | 0.0145 | 0.0143 | 0.0170 | 0.0157 | 0.0157 | 0.0138 | 0.0106 | 0.0153 |
FST | 0.43 | 0.50 | 0.44 | 0.52 | 0.66 | 0.54 | 0.59 | 0.51 | 0.52 |
K*S | 3.15*** | 2.39*** | 2.78*** | 2.59*** | 2.51*** | 2.7*** | 1.92*** | 2.49*** | 4.60*** |
Shared, polymorphic sites segregating for the same two variants in both arrangements; Fixed, fixed differences among arrangements; SX1, sites polymorphic in OST and monomorphic in O3+4; SX2, sites polymorphic in O3+4 and monomorphic in OST; DXY, average number of nucleotide differences per site between arrangements; K*S, genetic differentiation test statistic (see materials and methods); FST, proportion of nucleotide diversity attributable to variation among arrangements.
P < 0.001.
Analysis performed in the concatenated data set that includes all six newly reported regions and only 28 of the 41 Acph-1 sequences (see materials and methods).