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. 2005 Mar;169(3):1573–1581. doi: 10.1534/genetics.104.032748

TABLE 2.

Estimates of nucleotide polymorphism and divergence within chromosomal arrangements

Acph-1
rp49
S25
P22
P154
P2
S1
P21
OST O3+4 OST O3+4 OST O3+4 OST O3+4 OST O3+4 OST O3+4 OST O3+4 OST O3+4
n 21 20 16 18 14 14 14 14 14 14 14 14 14 14 14 14
S 92 91 45 54 58 93 38 70 43 56 50 70 17 34 30 58
πtotal 0.010 0.012 0.006 0.008 0.006 0.010 0.005 0.011 0.005 0.005 0.006 0.008 0.004 0.007 0.004 0.006
πsil 0.016 0.022 0.008 0.010 0.007 0.010 0.005 0.013 0.013 0.010 0.007 0.009 0.004 0.008 0.006 0.010
θsil 0.018 0.021 0.012 0.014 0.009 0.015 0.007 0.015 0.013 0.014 0.009 0.012 0.005 0.010 0.006 0.012
Ksil 0.043 0.046 0.013 0.018 0.016 0.018 0.020 0.027 0.034 0.035 0.023 0.028 0.018 0.022 0.023 0.026

n, sample size or number of sequences; S, number of polymorphic sites; πtotal, nucleotide diversity in all sites; πsil, nucleotide diversity in silent sites; θsil, heterozygosity per silent site based on segregating sites; Ksil, divergence per silent site between D. subobscura and D. madeirensis.