TABLE 1.
Quantiles
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Parameters | Distribution | Mean | Mode | 5% | 50% | 95% | |
N0, N1, N2, NA | Log Uniform[100, 40,000] | 6,690 | 100 | 135 | 1,993 | 29,676 | |
λ | Uniform[0, 1] | 0.500 | IR | 0.05 | 0.500 | 0.950 | |
tADM | Log Uniform[1, 1,000] | 143 | 1 | 1.4 | 30.8 | 704 | |
tDIV | Log Uniform[100, 100,000] | 14,540 | 100 | 141 | 3,170 | 70,942 | |
Log Uniform[10−4, 5 × 10−3] | 1.3 × 10−3 | 10−4 | 1.2 × 10−4 | 7.1 × 10−4 | 4.1 × 10−3 | ||
μi | Gamma(2, 2/) | 1.3 × 10−3 | 1.7 × 10−4 | 5.6 × 10−5 | 5.5 × 10−4 | 4.9 × 10−3 | |
Uniform[0, 0.5] | 0.250 | IR | 0.025 | 0.250 | 0.475 | ||
Pi | Beta(a, b)* | 0.250 | IR | 0.023 | 0.250 | 0.482 |
N0, N1, N2, and NA, effective population size (number of gene copies) in ancestral (N0), parental (N1 and N2), and admixed (NA) populations, respectively; λ, contribution of parental population 1 to the admixed population; tADM, time since admixture; tDIV, divergence time between parental populations before admixture; and μi, average and individual-locus mutation rates, respectively; and Pi, average and individual-locus parameters of the geometric distribution of the GSM, respectively; *Prior distribution for Pi is as follows: if ≥ 0.001 then P = Beta(a, b) with a = 0.5 + 199 and b = a(1 − )/; otherwise P = 0. IR, irrelevant.