TABLE 10.

Haplotypes from two hypervariable regions upstrem ofMLS1

	Region 1												Region 2
Strains	201	203	226	233	242	249	253	288	294	295	296	328	637	641	649	661	691	720	721
S. mikatae	C	A	T	T	T	C	—	A	A	G	G	G	N	N	N	N	N	N	N
S. paradoxus	C	A	T	A	A	C	A	A	T	A	C	G	T	C	T	A	T	A	A
4	T	.	.	.	.	.	.	C	.	T	T	.	.	T	.	.	.	C	T
K5	T	.	.	C	.	.	.	C	.	T	T	.	.	T	.	.	.	C	T
7	T	.	.	.	.	.	.	C	.	.	T	.	.	T	.	.	.	C	T
4	T	.	.	.	.	.	.	T	.	.	T	.	.	T	.	.	.	C	T
2	T	T	.	.	C	T	.	.	C	.	.	.	.	T	.	.	.	C	T
YJM421	G	.	.	.	C	T	.	C	C	.	T	.	.	T	.	G	.	C	T
YJM440	T	.	.	.	C	T	.	C	C	.	T	A	.	T	.	.	.	C	C
40	T	T	.	.	C	T	.	.	C	.	.	.	.	T	C	.	.	T	C
Y6	T	T	.	.	C	T	.	.	C	.	.	.	.	T	.	.	C	T	C
Y3	T	T	.	.	C	T	.	.	C	.	.	.	.	T	.	.	.	T	C
3	T	G	.	.	C	T	.	T	C	.	T	.	.	T	.	.	.	C	T
2	.	.	.	.	.	T	.	T	C	.	T	.	C	.	.	.	.	C	C
YJM339	.	.	.	.	.	T	.	T	C	.	T	.	.	.	.	.	.	C	C
3	.	.	G	.	.	T	G	C	C	.	T	.	.	.	.	.	.	C	C
YPS1000	T	.	.	.	.	T	.	C	C	.	T	.	.	.	.	.	.	C	C
YJM454	T	.	.	.	.	.	.	C	C	.	T	.	.	.	.	.	.	C	C
YPS1009	T	.	.	.	C	T	.	C	C	.	T	.	.	.	.	.	.	C	C
4	T	T	.	.	C	T	.	C	C	.	T	.	.	.	.	.	.	T	C

Nucleotide positions are shown in two regions upstream of MLS1. The strains column lists the number of strains with the haplotype shown on the right or the name of the strain if the haplotype is unique.