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. 2005 Aug;170(4):1459–1472. doi: 10.1534/genetics.104.039107

TABLE 1.

Summary of experimental exchange studies

Protein Source species Methoda Sitesb Variants Exchange effects assayed Citation
LacI Escherichia coli  Sup  328 (360) 4038 Operon repression,
  in vivo
Markiewicz et al. (1994)
Lysozyme Phage T4  Sup  155 (164) 1918 Plaque size, in vivo Rennell et al. (1991)
Interleukin-3 Homo sapiens  Sat  103 (152)  754 Cell proliferation,
  in vivo
Olins et al. (1995)
Barnase E. coli  Sat  109 (110)  676 RNAse activity, in vivo Axe et al. (1998)
β-Lactamase Pseudomonas  Sat   27 (246)  513 Ampicillin resistance,
  in vivo
Materon and Palzkill (2001)
RecA E. coli  Sat   20 (323)  380 Plaque size, in vivo Hortnagel et al. (1999)
Reverse transcriptase HIV  Sat  109 (300)  366 RNA-dependent DNA
  polymerase activity,
  in vivo
Wrobel et al. (1998)
Protease HIV  Sat   99 (99)  336 Protease activity,
  in vivo
Loeb et al. (1989)
Protein V Phage f1  Sat   86 (87)  313 Host inhibition,
  in vivo
Zabin et al. (1991)
Nuclease Staphylococcus  Scan  143 (149)  290 ΔΔG, in vitro Green et al. (1992); Meeker et al. (1996); Shortle et al. (1990)
Growth hormone H. sapiens  Scan   50 (191)   50 Dissociation constant,
  in vitro
Cunningham and Wells (1989)
Insulin H. sapiens  Scan   37 (51)   37 Receptor affinity,
  in vitro
Kristensen et al. (1997)
Total 1266 9671
a

Sup, nonsense suppression; sat, saturation mutagenesis; scan, alanine scanning (Ala and Gly scanning in the case of Nuclease).

b

Amino acid positions altered (in parentheses, total number of positions in the protein).