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High confidence peptide identifications across 32 analyses using 50:1 relative prior probabilities.
| Protein source (# of PMT tags) | Number of PMT tags observed | Average number of identifications | feature identifications |
| BSA (179) | 47 | 14.1 | 10.4% |
| Bovine (607) | 72 | 2.6 | 3.0% |
| Human (385) | 37 | 4.8 | 2.8% |
| Marker (18) | 12 | 6.9 | 1.3% |
| Trypsin (24) | 6 | 6.8 | 0.6% |
| Shewanella (70,832) | 1873 | 2.7 | 79.7% |
| Other (917) | 54 | 2.6 | 2.2% |
