TABLE 2.
Primer | Sequence (5′–3′) | Position in DNAa | Position in RNAa |
---|---|---|---|
−1577F | ATGCAGCCATGGTGGGAGTGC | −1577–−1557 | |
ATGF | ATGGCGGACGAGATGGATCC | 1–20 | 1–20 |
ATGR | TCATGGGATCCATCTCGTCC | 25–6 | 25–6 |
500F | TTGCTCAGCTGCAGATCAAACG | 477–498 | |
500R | TCGTTTGATCTGCAGCTGAGC | 499–479 | |
TILL1F | AACAACCCCAACGGCTTTGTG | 700–720 | |
TILL1R | AAAGCCGTTGGGGTTGTTGC | 717–698 | 360–341 |
TILL2F | CTCAACTTCAACGCCTACCTC | 1089–1109 | 505–525 |
TILL2R | TGAGGTAGGCGTTGAAGTTGAGG | 1110–1088 | 526–504 |
928F | TGCCTGTCCTGCCTGCTCACC | 1790–1810 | 928–948 |
1195R | AGCAGGCCGGCAAAGAACACG | 2058–2038 | 1196–1176 |
Short1F | ATCGGCATCATCTCCATCTTCG | 2392–2413 | 1303–1324 |
Short1R | AGATGGAGATGATGCCGATCACC | 2410–2388 | |
Short2F | ATTGGACTTTCTGCTCATGG | 3484–3503 | 2066–2085 |
UGA-1R | GTGCTTTCCATCTGAGCACC | 3732–3713 | 2314–2295 |
EndR | TTTGGACGGCAGACTGTGCG | 4009–3990 | 2591–2572 |
Relative to ATG translational start. Positions of the primers are also shown in Figure 6A.