TABLE 1 .
List of oligonucleotide primers used for PCR amplification
| Name | Sequence (5′–3′) | Application |
|---|---|---|
| PB31 | GGCAGGTCTAAAGGTAGCCACG | LR of group 3 (from msf 1.2) |
| PMR1 | AAAAGCCCTTGGTGGTGAAGCC | LR of B44, B1 group 2 (from B6 phb1.2R) |
| PMR2 | ACACCAAACCTGAGCGACAATC | LR of B44, B1 group 2 (from B3 Rcb3F) |
| PMR3 | CTCCATTCCGATATCACGTTCT | B1-RCB2-end-F |
| PMR4 | CAACAGAATCGTTCAACAAAACTC | B44-RCB2-end-F |
| PMR5 | GTATGGGCGCCTTACGTTT | phb3.23 primer 1 |
| PMR6 | AGACAAAGGCGATCGGATG | phb3.23 primer 2 |
| PMR7 | TTTGGACCATTGTTCGCTTT | phb3.13 primer 1 |
| PMR8 | CACAGAAGGGACTACGCACA | phb3.13primer 2 |
| PMR9 | TACCCTAACGTCCACGATGA | rcb33primer 1 |
| PMR10 | AAGGGGTCGTGGGCTAGTAT | rcb33primer 2 |
| PMR11 | GGCGAGTTGCTTATCTGTGG | phb13primer 1 |
| PMR12 | CTCTGTCATTCGCCTTGCAC | phb13primer 2 |
| PMR13 | CTCAAGAACATGGCGTCGAT | rcb13primer 1 |
| PMR14 | GCTGAAGTCGTCAAGACGTG | rcb13primer 2 |
| PMR15 | TAAGGAGTCAGCCCGAAGAA | phb3.242primer 1 |
| PMR16 | TTAAACGCTTTCCACAATGG | phb3.242primer 2 |
| PMR17 | TCAGCACAAGAGCAGGAAGA | phb3.142primer 1 |
| PMR18 | CGAATTCAGACGACGCTCAT | phb3.142primer 2 |
| PMR19 | ACCCTCAAAACCTCCAGATG | rcb342primer 1 |
| PMR20 | GTGAGCCAGAAACCAGAGGA | rcb342primer 2 |
| PMR21 | GCACAGACCGACCAGTAAGC | phb2.242primer 1 |
| PMR22 | CGGAACAACCTAAAGACGGTA | phb2.242primer 2 |
| PMR23 | TTGGAAGGGCACAAAAGCTA | phb2.142primer 1 |
| PMR24 | TAGCTGCAAAGGGATTGAGC | phb2.142primer 2 |
| PMR25 | TACCCTCAATGGACACGATG | rcb242primer 1 |
| PMR26 | AGCTAGCTGTGACGGTCGTT | rcb242primer 2 |
| PMR27 | AAGCGATAACGCACCAGAAG | phb3.26primer 1 |
| PMR28 | CAGTCGACAATCGCTACGAA | phb3.26primer 2 |
| PMR29 | GCATACGTACGGCAAGGAGT | phb3.16primer 1 |
| PMR30 | CGATTTTGACCACACATCCA | phb3.16primer 2 |
| PMR31 | TCTTCTCCCTCCTCACCTTG | rcb36primer 1 |
| PMR32 | GTGAGCCAGAAACCAGAGGA | rcb36primer 2 |
| PMR33 | TGCCACTCGAAGAGAGACAA | phb2.26primer 1 |
| PMR34 | ATGGCCGGATGTATAAAACG | phb2.26primer 2 |
| PMR35 | CTTCATGTCGAAGTTGTTTCG | phb2.16primer 1 |
| PMR36 | CGCGTACGGTCCTAATCG | phb2.16primer 2 |
| PMR37 | GACGCTTGGGGCGGACGAT | rcb26primer 1 |
| PMR38 | AAGCTTAGTAAGAGGACATGAGTCC | rcb26primer 2 |
| PMR39 | CTCGAGTTCCTTGGGTTGGT | phb1.26primer 1 |
| PMR40 | AAGGGCTCGGATAGAGCTTC | phb1.26primer 2 |
| PMR41 | CCGTTCCAAGTTTTGACGTT | phb1.16primer 1 |
| PMR42 | GCGAACTCACTGTTGCTTCA | phb1.16primer 2 |
| PMR43 | CCCCGACGGCCTTGTACTGTAGC | rcb16primer 1 |
| PMR44 | CTCGCTCTGCTCCCGGACC | rcb16primer 2 |
| PMR45 | GTTGAGATCAAGGCGAACGAT | phb2.244primer 1 |
| PMR46 | CCGCAATTCTCGGTATAAAGC | phb2.244primer 2 |
| PMR47 | GGTTTATGTTGAGGCGGACTAC | phb2.144primer 1 |
| PMR48 | TACTGACTACAATGCGGACTCTG | phb2.144primer 2 |
| PMR49 | ATCTTAAAACTGTCATCTGCCACA | rcb244primer 1 |
| PMR50 | CAGGGCAAATGAGAAAGATAGAAG | rcb244primer 2 |
| PMR51 | GTTTCCACGAAACACGCAAAC | phb2.21primer 1 |
| PMR52 | AAGTCTGTCAAGCAATGTTAGCC | phb2.21primer 2 |
| PMR53 | GCAGATGGCAGGATCTTTGT | phb2.11primer 1 |
| PMR54 | AGGGGTTAGACGATCCAGGTAT | phb2.11primer 2 |
| PMR55 | TAAAGACCTGATTCTGCTTCAAGG | rcb21primer 1 |
| PMR56 | AGGGCAAATGAGAAAGAAAGAAGT | rcb21primer 2 |
| PMR57 | CACAGTCTTAAGCATTCTCAGTCAA | phb3.343primer 1 |
| PMR58 | ATTATCGAGGTTTGCTTTGCTCT | phb3.343primer 2 |
| PMR59 | ATTGATAATTAAGGCGACCTTCTG | phb3.243primer 1 |
| PMR60 | ACGGACTCTAAGATCGATGTTCTC | phb3.243primer 2 |
| PMR61 | TGGTTTGCATACAAAGGTATTGTC | phb3.143primer 1 |
| PMR62 | TAACATATGGAGATGGTTGGGTAG | phb3.143primer 2 |
| PMR63 | ACATCTTCTCCTCTCCTCCTTTTC | rcb343primer 1 |
| PMR64 | GCTGGTACTAAGTTAATGTCATCGAG | rcb343primer 2 |
| PMR65 | CAAATTGCTGCATTGAATAGAGAG | phb2.343primer 1 |
| PMR66 | GAAGCTCTTCGTCATAATCCTGTT | phb2.343primer 2 |
| PMR67 | TGAGCTCAGTGAGTGTTGAAAGA | phb2.243primer 1 |
| PMR68 | ATTCGAGTCTAAGGAAAGGAGTGA | phb2.243primer 2 |
| PMR69 | GGATCCTGTTAACCGACGTTAT | phb2.143primer 1 |
| PMR70 | GATGACTTGCGTCTGAGTGAACTA | phb2.143primer 2 |
| PMR71 | ATGCTAAATATGCTCAAATACTGTGC | rcb243primer 1 |
| PMR72 | AAGTCATGAAAAGATCGTGTGTAAAG | rcb243primer 2 |
| PMR73 | TAATCCGAGCGATAAAACACAGTA | phb35primer 1 |
| PMR74 | AGTTGGGAGTAAGATGGCTTACAA | phb35primer 2 |
| PMR75 | GACCTCTCTGCTTTTCACGTTATAC | rcb35 primer 1 |
| PMR76 | ACTGTCCAGAGAAAATTGTCAGACTT | rcb35primer 2 |
| PMR77 | ATCTCTCACTCGTCCACCAAAC | mfs1.1 primer 1 |
| PMR78 | GGTCCTACGTCCATCCTAATGAC | mfs1.1 primer 2 |
| PMR79 | GCTGGTAAAACGATAACACGATT | mfs1.2 primer 1 |
| PMR80 | TAAGACTGTATGGGTCCACAACC | mfs1.2 primer 2 |