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. 1996 Jan 1;24(1):127–131. doi: 10.1093/nar/24.1.127

PAH Mutation Analysis Consortium Database: a database for disease-producing and other allelic variation at the human PAH locus.

L Hoang 1, S Byck 1, L Prevost 1, C R Scriver 1
PMCID: PMC145593  PMID: 8594560

Abstract

The PAH Mutation Analysis Consortium (81 investigators, 26 countries) is engaged in mutation detection at the human PAH locus. Ascertainment of probands occurs largely through newborn screening for hyperphenylalaninemia. A relational database records allelic variation (disease-producing and polymorphic) at the locus. Information is distributed by Newsletter, diskette (WINPAHDB software stand-alone executable on IBM compatible hardware), and at a 'real' site on the Worldwide Web (http://www.mcgill.ca/pahdb). The database presently records (Sept. 27, 1995) 248 alleles in 798 different associations (with polymorphic haplotype, geographic region and population) along with additional information. The database, as a record of human genetic diversity, at a particular locus, contributes to the study of human evolution and demic expansion; it also has medical relevance.

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Selected References

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  1. Beaudet A. L., Tsui L. C. A suggested nomenclature for designating mutations. Hum Mutat. 1993;2(4):245–248. doi: 10.1002/humu.1380020402. [DOI] [PubMed] [Google Scholar]
  2. Byck S., Morgan K., Tyfield L., Dworniczak B., Scriver C. R. Evidence for origin, by recurrent mutation, of the phenylalanine hydroxylase R408W mutation on two haplotypes in European and Quebec populations. Hum Mol Genet. 1994 Sep;3(9):1675–1677. doi: 10.1093/hmg/3.9.1675. [DOI] [PubMed] [Google Scholar]
  3. DiLella A. G., Kwok S. C., Ledley F. D., Marvit J., Woo S. L. Molecular structure and polymorphic map of the human phenylalanine hydroxylase gene. Biochemistry. 1986 Feb 25;25(4):743–749. doi: 10.1021/bi00352a001. [DOI] [PubMed] [Google Scholar]
  4. Eisensmith R. C., Woo S. L. Updated listing of haplotypes at the human phenylalanine hydroxylase (PAH) locus. Am J Hum Genet. 1992 Dec;51(6):1445–1448. [PMC free article] [PubMed] [Google Scholar]
  5. Goltsov A. A., Eisensmith R. C., Konecki D. S., Lichter-Konecki U., Woo S. L. Associations between mutations and a VNTR in the human phenylalanine hydroxylase gene. Am J Hum Genet. 1992 Sep;51(3):627–636. [PMC free article] [PubMed] [Google Scholar]
  6. Goltsov A. A., Eisensmith R. C., Naughton E. R., Jin L., Chakraborty R., Woo S. L. A single polymorphic STR system in the human phenylalanine hydroxylase gene permits rapid prenatal diagnosis and carrier screening for phenylketonuria. Hum Mol Genet. 1993 May;2(5):577–581. doi: 10.1093/hmg/2.5.577. [DOI] [PubMed] [Google Scholar]
  7. Guldberg P., Henriksen K. F., Thöny B., Blau N., Güttler F. Molecular heterogeneity of nonphenylketonuria hyperphenylalaninemia in 25 Danish patients. Genomics. 1994 May 15;21(2):453–455. doi: 10.1006/geno.1994.1296. [DOI] [PubMed] [Google Scholar]
  8. Guldberg P., Mikkelsen I., Henriksen K. F., Lou H. C., Güttler F. In vivo assessment of mutations in the phenylalanine hydroxylase gene by phenylalanine loading: characterization of seven common mutations. Eur J Pediatr. 1995 Jul;154(7):551–556. doi: 10.1007/BF02074833. [DOI] [PubMed] [Google Scholar]
  9. Harper R. World Wide Web resources for the biologist. Trends Genet. 1995 Jun;11(6):223–228. doi: 10.1016/s0168-9525(00)89055-1. [DOI] [PubMed] [Google Scholar]
  10. Konecki D. S., Wang Y., Trefz F. K., Lichter-Konecki U., Woo S. L. Structural characterization of the 5' regions of the human phenylalanine hydroxylase gene. Biochemistry. 1992 Sep 8;31(35):8363–8368. doi: 10.1021/bi00150a033. [DOI] [PubMed] [Google Scholar]
  11. Kwok S. C., Ledley F. D., DiLella A. G., Robson K. J., Woo S. L. Nucleotide sequence of a full-length complementary DNA clone and amino acid sequence of human phenylalanine hydroxylase. Biochemistry. 1985 Jan 29;24(3):556–561. doi: 10.1021/bi00324a002. [DOI] [PubMed] [Google Scholar]
  12. Lidsky A. S., Ledley F. D., DiLella A. G., Kwok S. C., Daiger S. P., Robson K. J., Woo S. L. Extensive restriction site polymorphism at the human phenylalanine hydroxylase locus and application in prenatal diagnosis of phenylketonuria. Am J Hum Genet. 1985 Jul;37(4):619–634. [PMC free article] [PubMed] [Google Scholar]
  13. Scriver C. R., Eisensmith R. C., Woo S. L., Kaufman S. The hyperphenylalaninemias of man and mouse. Annu Rev Genet. 1994;28:141–165. doi: 10.1146/annurev.ge.28.120194.001041. [DOI] [PubMed] [Google Scholar]
  14. Scriver C. R. Science, medicine and phenylketonuria. Acta Paediatr Suppl. 1994 Dec;407:11–18. doi: 10.1111/j.1651-2227.1994.tb13441.x. [DOI] [PubMed] [Google Scholar]

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