TABLE 3.
Estimates of genetic flux Φ due to gene conversion between different gene arrangements in D. pseudoobscura
Locus | Arr1 | Arr2 | φ | E(N) (95%CI) | E(T) | Φ (Hc) | H | cbp |
---|---|---|---|---|---|---|---|---|
en | PP | CH | 0.9970 | 330.0 (75.1–1,041.6) | 4.7 × 107 | 8.4 × 10−8 | 0.054 | 1.4 × 10−6 |
Mef 2 | ST | TL | 0.9963 | 271.7 (40.6–1,063.8) | 1.6 × 107 | 1.0 × 10−7 | 0.274 | 2.9 × 10−7 |
Amy 1 | ST | CH | 0.9940 | 167.2 (36.0–531.9) | 4.0 × 107 | 1.2 × 10−7 | 0.280 | 1.6 × 10−7 |
vg | PP | CH | 0.9965 | 282.5 (77.9–900.9) | 2.4 × 107 | 9.2 × 10−8 | 0.054 | 1.1 × 10−6 |
vg | PP | TL | 0.9942 | 173.3 (57.8–473.9) | 1.8 × 107 | 2.3 × 10−7 | 0.110 | 8.3 × 10−7 |
vg | ST | CH | 0.9967 | 304.0 (83.6–970.8) | 2.1 × 107 | 1.1 × 10−7 | 0.280 | 2.6 × 10−7 |
vg | CH | TL | 0.9900 | 99.7 (14.2–390.6) | 1.5 × 107 | 1.3 × 10−7 | 0.257 | 1.2 × 10−7 |
F6 | AR | CH | 0.9728 | 36.7 (4.1–39.3) | 5.5 × 107 | 1.1 × 10−7 | 0.197 | 4.8 × 10−8 |
F6 | AR | TL | 0.9929 | 141.0 (40.6–390.6) | 4.6 × 107 | 1.4 × 10−7 | 0.238 | 2.0 × 10−7 |
F6 | PP | CH | 0.9947 | 190.1 (48.0–609.8) | 3.4 × 107 | 9.5 × 10−8 | 0.054 | 7.8 × 10−7 |
All events | 205.8 (128.5–323.6) | Mean | 1.2 × 10−7 | 3.4 × 10−6 |
Arr1, gene arrangement 1; Arr2, gene arrangement 2; φ, probability that a converting tract elongates to an additional nucleotide; E(N), expected true gene conversion tract length with 95% confidence interval, E(T), the sum of branch lengths in the genealogy; Φ, the flux of gene conversion events per generation between arrangement within locus; H, maximum heterozygosity of gene arrangements 1 and 2 across all populations (Anderson et al. 1991); cbp, conversion rate per base pair per generation.