Table VI.

Fifty most common Inter-Pro families represented within the apple NR sequences

Inter-Pro No.	Description	Frequency
IPR000719	Protein kinase	801
IPR002290	Ser-Thr protein kinase	359
IPR001611	LRR	346
IPR008271	Ser-Thr protein kinase, active site	274
IPR001245	Tyr protein kinase	269
IPR000504	RNA-binding region RNP-1 (RNA recognition motif)	202
IPR001680	G-protein β WD-40 repeat	193
IPR007090	LRR, plant specific	170
IPR001128	Cytochrome P450	159
IPR001841	Zinc finger, RING	156
IPR001005	Myb DNA-binding domain	133
IPR001806	Ras GTPase superfamily	124
IPR000626	Ubiquitin	124
IPR002048	Calcium-binding EF-hand	118
IPR002885	PPR repeat	117
IPR002110	Ankyrin	111
IPR001810	Cyclin-like F-box	106
IPR006662	Thioredoxin-type domain	100
IPR000608	Ubiquitin-conjugating enzymes	98
IPR001410	DEAD/DEAH box helicase	96
IPR001440	TPR repeat	95
IPR002401	E-class P450, group I	95
IPR001932	Protein phosphatase 2C-like	83
IPR001993	Mitochondrial substrate carrier	81
IPR001623	Heat shock protein DnaJ, N terminus	78
IPR001471	Pathogenesis-related transcriptional factor and ERF	76
IPR002198	Short-chain dehydrogenase/reductase SDR	73
IPR001087	Lipolytic enzyme, G-D-S-L	65
IPR001344	Chlorophyll a/b-binding protein	63
IPR001356	Homeobox	63
IPR007087	Zinc finger, C2H2 type	61
IPR002130	Peptidyl-prolyl cis-trans isomerase, cyclophilin type	60
IPR003439	ABC transporter	60
IPR002347	Glucose/ribitol dehydrogenase	60
IPR001878	Zinc finger, CCHC type	57
IPR000157	TIR	56
IPR000795	Protein synthesis factor, GTP binding	54
IPR000425	Major intrinsic protein	53
IPR002016	Haem peroxidase, plant/fungal/bacterial	52
IPR001395	Aldo/keto reductase	51
IPR000008	C2 domain	49
IPR002423	Chaperonin Cpn60/TCP-1	48
IPR004087	KH	46
IPR000916	Bet v I allergen	45
IPR001092	Basic helix-loop-helix dimerization domain bHLH	43
IPR001023	Heat-shock protein Hsp70	42
IPR000571	Zinc finger, C-x8-C-x5-C-x3-H type	41
IPR000217	Tubulin	40
IPR001938	Thaumatin, pathogenesis-related	39
IPR000823	Plant peroxidase	38