Table 2.
Clone* | No.† | Size | Accession no. | Homology to published sequences in the GenBank
database
|
Homology to the SEREX database‡ (clone) | ||
---|---|---|---|---|---|---|---|
Gene | Accession no. | Description | |||||
se1-1 | 2 | 2363 | AF273042 | KIAA0336 | AB002334 | brain cDNA clone (49) | ⊘ |
se2-1 | 6 | 2564 | AF273043 | SCP-1 | D67035 | SCP-1 (43) | Hom-TSRCC1-7 (22) |
se2-2 | 1 | 2317 | AF273044 | KIAA0373 | AB002371 | brain cDNA clone (49) | ⊘ |
se2-5 | 2 | 2004 | AF177228 | ⊘ | ⊘ | ⊘ | |
se14-2 cTAGE-1 | 1 | 1284 | AF177229 | ⊘ | ⊘ | ⊘ | |
se14-3 | 1 | 2620 | AF273045 | Rack 7 | U48251 | protein kinase C-binding protein; Kuroda et al, not published | ⊘ |
se20-4 | 5 | 2830 | AF273046 | HRIHFB 2216 | AB015345 | nuclear targeted protein (50) | ⊘ |
se20-7 | 2 | 2100 | AF273047 | trans-golgi | U41740 | human trans-golgi p230 (52) | NGO-St-67 (and others)§ |
se20-9 | 1 | 5629 | AF273048 | KIAA0204 | D86959 | brain cDNA clone (48) | ⊘ |
se20-10 | 1 | 1991 | AF177227 | ⊘ | ⊘ | ⊘ | |
se33-1 | 1 | 3962 | AF273049 | NP220 | D83032 | DNA-binding nuclear protein (51) | LONY-BR-13¶ |
se37-2 | 1 | 2710 | AF273050 | UBE3A | U84404 | E6-assoc. protein E6-AP/ubiquitinprotein ligase (56) | NY-CO-30 (57) |
se57-1 | 2 | 3997 | AF273051 | ⊘ | ⊘ | TL15-72‖ | |
se70-2 | 1 | 1592 | AF273052 | ⊘ | ⊘ | ⊘ | |
se89-1 | 1 | 3462 | AF273053 | RAP140 | AF180425 | retinoblastoma-associated protein | ⊘ |
⊘, no homologous sequences found. Similarity in the overlapping sequences was always above 98%.
First identified clone of each antigen.
Total number of homologous clones to this antigen found in the present study.
The SEREX database is maintained by the Ludwig Institute (Switzerland) and can be found on the internet (http://www.licr.org/SEREX.html).
Y. Obata, Aichi Cancer Center, Japan.
M. J. Scanlan, Ludwig Institute for Cancer Research, New York.
A. Güre, Ludwig Institute for Cancer Research, New York.