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. Author manuscript; available in PMC: 2006 May 19.
Published in final edited form as: Mol Biol Evol. 2005 Aug 3;22(12):2386–2394. doi: 10.1093/molbev/msi229

Table 1.

Estimates of the Numbers of Homeobox Genes in 11 Species and the MRCA of All 11 Species (Archi-MRCA)

Nematodes
Insects
Teleosts
Rodents
Archi-MRCA Caenorhabditis elegans Caenorhabditis briggsae Fruitfly Mosquito Tunicate Pufferfish Zebrafish Frog Mouse Rat Humans
Single-homeodomain proteins 82 83 68 97 81 97 229 279 191 234 205 217
Multihomeodomain proteins (6) 9 (30) 2 (4) 2 (5) 2 (4) 2 (5) 10 (36) 10 (37) 7 (27) 8 (27) 11 (35) 13 (40)
Total number of proteins (homeodomains) (88) 92 (113) 70 (72) 99 (102) 83 (85) 99 (102) 239 (265) 289 (316) 198 (218) 242 (261) 216 (240) 230 (257)

Note.—The estimates of the numbers of homeobox genes are shown outside parentheses, and those of homeodomains are shown in parentheses. These two numbers are different because of multihomeodomain proteins.