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. 2006 Mar 13;7:133. doi: 10.1186/1471-2105-7-133

Figure 3.

Figure 3

Comparison of score seeds designed for noncoding HSPs. Comparison of score seeds using different score matrices (M0, Mz and Mnc). The leftmost seed on each ROC curve has weight 12, while subsequent seeds decrease w by one. Score thresholds were chosen to produce similar fp rates for seeds of the same weight. Curves corresponding to score seeds under Mnc and Mz nearly coincide.