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. 2006 Mar 13;7:133. doi: 10.1186/1471-2105-7-133

Figure 4.

Figure 4

Comparison of transition seeds on EST sequence alignment. Each ROC curve shows seeds with the same transition weight m but different match weights w. Each curve starts with a seed with w + m = 11 and then decreases w while holding m constant. Each point represents a locally optimal set of seeds. A ROC curve for single basic seeds is also plotted for a comparison.