TABLE 1.
PCR | Primerc | Primer sequence | Target genus/genera | Annealing temp (°C) | No. of Pbr isolates that yielded a PCR product |
---|---|---|---|---|---|
1a | 79JC | 5′ TGACTGGCGAATCGGTBCCBG 3′ | Bacillus, Acinetobacter, Pseudomonas | 59 | 8 |
84JC | 5′ GGAGCATCGTTAATDCCRTCDCC 3′ | ||||
132JC | 5′ CTAACTGGCGAATCAGTCCC 3′ | Arthrobacter | 55 | 25 | |
84JC | 5′ GGAGCATCGTTAATDCCRTCDCC 3′ | ||||
2b | 81JC | 5′ GGATGTCCTTGTGCTYTART 3′ | Bacillus, Acinetobacter, Pseudomonas | 49 | 5 |
84JC | 5′ GGAGCATCGTTAATDCCRTCDCC 3′ | ||||
133JC | 5′ CCCTCACCTTGTGCYCTGG 3′ | Arthrobacter | 49 | 23 | |
84JC | 5′ GGAGCATCGTTAATDCCRTCDCC 3′ |
Expected product size, approximately 1.2 kb.
Expected product size, approximately 0.75 kb.
See reference 11 for specific thermocycling parameters.