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. 2006 May;72(5):3111–3118. doi: 10.1128/AEM.72.5.3111-3118.2006

TABLE 1.

Oligonucleotide primers used during nested PCRs to amplify PIB-type ATPases and numbers of isolates which yielded amplicons

PCR Primerc Primer sequence Target genus/genera Annealing temp (°C) No. of Pbr isolates that yielded a PCR product
1a 79JC 5′ TGACTGGCGAATCGGTBCCBG 3′ Bacillus, Acinetobacter, Pseudomonas 59 8
84JC 5′ GGAGCATCGTTAATDCCRTCDCC 3′
132JC 5′ CTAACTGGCGAATCAGTCCC 3′ Arthrobacter 55 25
84JC 5′ GGAGCATCGTTAATDCCRTCDCC 3′
2b 81JC 5′ GGATGTCCTTGTGCTYTART 3′ Bacillus, Acinetobacter, Pseudomonas 49 5
84JC 5′ GGAGCATCGTTAATDCCRTCDCC 3′
133JC 5′ CCCTCACCTTGTGCYCTGG 3′ Arthrobacter 49 23
84JC 5′ GGAGCATCGTTAATDCCRTCDCC 3′
a

Expected product size, approximately 1.2 kb.

b

Expected product size, approximately 0.75 kb.

c

See reference 11 for specific thermocycling parameters.