Table 1.
Examples of fusion transcripts identified by 5′ RACE from the gene trap GS cell lines
| No. | Sequences of the trapped gene | Homology (%) | GenBank | Symbol | Chromosome | Insertion | Definition |
|---|---|---|---|---|---|---|---|
| 39 | ggtgagcacc ttgggattcc ggccgccaag ctcgcgg | 100/100 (100) | NM_008756 | Ocln | 13 | First intron | Occludin |
| 67 | gctgctcagt gtggtggatc atttcaaccg ctcgcgg | 100/100 (100) | NM_010817 | Psmd7 | 8 | First intron | Proteasome (prosome, macropain) 26S subunit, non-ATPase, 7 |
| 78 | nngaaagact tggtaatggc gacgggtttg ctcgcgg | 28/28 (100) | NM_177993 | Hbp1 | 12 | First intron | High-mobility group box transcription factor 1 |
| 97 | attcccacct gctgacttaa gtgcgcccag ctcgcgg | 100/100 (100) | NM_009686 | Apbb2 | 5 | Second intron | Amyloid β (A4) precursor protein-binding, family B, member 2 |
| 101 | ccgccgcgcc cggccccgcg cgcgacccgg ctcgcgg | 100/100 (100) | NM_010757 | Mafk | 5 | First intron | V-maf musculoaponeurotic fibrosarcoma oncogene family, protein K |
| 104 | ccggtgcggc ccggatccgt ggcacgggag ctcgcgg | 98/100 (98) | NM_030730 | Srisnf21 | 9 | First intron | Steroid receptor-interacting SNF2 domain protein |
| 112 | tctgtacctg acccagcagn tnatattaan ctcgcgg | 88/100 (88) | NM_133659 | Erg | 16 | First intron | Avian erythroblastosis virus E-26 (v-ets) oncogene related |
| 114 | tcttcaagta catcatcatc ggcgacacag ctcgcgg | 99/100 (99) | NM_021518 | Rab2 | 4 | First intron | RAB2, member RAS oncogene family |