Table 7.

Homogeneity of Consensus Alleles for the Sequenced Haplotype Clusters^[Note]

	Percentage of Haplotypes in Cluster Carrying Consensus Allele at																																		Mean Homogeneity forb
Clustera	D6S273	M6S124	TNFB	M6S125	MICA	M6S166	M6S101	M6S151	M6S167	M6S105	M6S168	M6S178	M6S102	M6S172	M6S176	M6S145	M6S143	M6S111	M6S169	M6S200	M6S198	M6S190	M6S161	M6S160	M6S159	M6S162	M6S224	M6S179	M6S181	M6S187	M6S164	M6S163	M6S165	M6S201	All 34 Markers	24 Markers	21 Markers
7 (66)	82	84	87	79	97	97	95	100	97	100	87	100	100	100	100	100	97	100	92	100	100	97	64	92	100	97	72	100	100	100	100	97	72	45	92	95	97
37 (14)	72	78	86	93	94	95	90	99	98	59	46	99	100	99	99	100	100	99	100	98	99	100	100	100	99	100	74	100	99	92	99	77	78	58	91	94	97
41 (19)	81	86	86	94	97	90	93	100	84	100	97	97	100	100	100	100	100	90	100	97	97	100	97	100	100	100	77	96	92	90	87	76	86	61	93	96	98
44 (25)	90	90	97	95	100	98	92	100	88	100	99	99	100	100	100	99	100	95	100	100	100	99	99	98	99	100	76	100	100	95	87	87	86	74	95	98	99
49 (26)	79	84	97	89	100	91	97	99	85	100	99	99	100	100	99	99	99	92	100	99	100	90	100	100	100	99	95	100	100	88	99	98	93	71	95	98	98
51 (17)	97	95	97	100	100	100	97	97	65	100	100	95	100	100	100	100	97	73	100	100	100	88	92	76	100	84	39	100	100	100	100	95	84	58	92	92	95
60 (48)	88	88	93	72	100	98	76	100	86	100	91	100	98	98	97	100	100	100	98	98	100	50	100	100	100	100	81	100	97	100	98	90	86	65	93	95	96
Meanc	84	86	92	89	98	96	91	99	86	94	88	98	100	100	99	100	99	93	99	99	99	89	93	95	100	97	73	99	98	95	96	89	84	62	93	95	97

Note.— The table displays all 34 markers subjected to long haplotype clustering in our original study,¹⁴ in centromeric→telomeric order, from left to right. Numbers indicate the percentage of founder haplotypes in the cluster that carry the consensus allele for the marker. The sequenced portion of the haplotype clusters is shaded.

^aHaplotype-cluster number for the new analysis of the present study (cluster number from our original study¹⁴).

^bThe mean homogeneity among founder haplotypes for each cluster for all 34 markers, for the 24 markers within the sequenced portion of the cluster haplotypes, and for the 21 most stable markers (excludes M6S167, M6S168, and M6S224) within the sequenced portion of the haplotypes.

^cThe mean homogeneity of haplotypes among all sequenced clusters for each marker.