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. 2006 May 25;79(1):67–84. doi: 10.1086/504729

Table 3. .

Age-Related Correlation in Sperm DNA–HpaII Data Set[Note]

University Health Network Accession Number Age Correlationa Genome Locationb Nearest Gene Distance
(bp)
Nearest Gene Entrez GeneID Nearest Gene
UHNhscpg0007432 −.918421653 chr 14: 73296338-73296842 0 91748 C14orf43
UHNhscpg0004878 −.644590225 chr 18: 58533334-58533572 1,366 23239 PHLPP
UHNhscpg0001279 −.635499301 chr 2: 15682160-15683012 0 1653 DDX1
UHNhscpg0010337 −.633961562 chr 4: 24692990-24693129 0 55203 LGI2
UHNhscpg0000523 −.628700319 chr 14: 89918538-89919063 14,066 801 CALM1d
UHNhscpg0009687 −.61929126 chr 11: 71430395-71430772 0 4926 NUMA1
UHNhscpg0002060 −.607457801 chr 7: 117447932-117448126 10,775 56311 ANKRD7
UHNhscpg0006282 −.603136381 chr 14: 50203675-50203889 0 60485 SAV1
UHNhscpg0008336 −.60134971 chr 3: 4211475-4211590 0 AY358092
UHNhscpg0002269 −.594487623 chr 16: 18719890-18721070 0 23204 ARL6IP
UHNhscpg0006883 −.590701745 chr 7: 20603836-20604518 4,091 221833 SP8
UHNhscpg0003324 −.57876246 chr 8: 80412773-80412879 272,989 11075 STMN2c
UHNhscpg0007072 −.578612647 chr 13: 20930559-20930802 0 253832 FLJ25952
UHNhscpg0002392 −.577309667 chr 12: 55758348-55759109 0 23306 AB006624
UHNhscpg0010814 −.574206485 chr 9: 111503780-111504547 0 548645 GNG10
UHNhscpg0002833 −.568147866 chr 11: 62202212-62203556 0 LOC51035
UHNhscpg0007366 −.562953631 chr 13: 20770028-20770950 73,766 FLJ25952
UHNhscpg0010640 −.55975393 chr 16: 81828071-81828454 0 1012 CDH13d
UHNhscpg0003417 −.55808056 chr 8: 80412825-80412879 272,989 11075 STMN2c
UHNhscpg0007351 −.557144063 chr 11: 133162749-133163293 52,433 219938 SPATA19e
UHNhscpg0011679 −.553844494 chr 19: 5999835-6000028 0 5990 RFX2e
UHNhscpg0011303 −.551957348 chr 1: 114639352-114639536 12,748 51592 TRIM33
UHNhscpg0000547 −.551565288 chr 9: 86126053-86126501 0 81689 HBLD2c
UHNhscpg0010993 −.550180272 chr 1: 46478949-46480024 0 10489 AF370430
UHNhscpg0000380 −.545084964 chr X: 134996172-134996628 0 2273 FHL1
UHNhscpg0003556 −.544679103 chr X: 62745590-62745765 0 23229 ARHGEF9c
UHNhscpg0002314 −.539967585 chr 3: 157491673-157492091 0 7881 KCNAB1
UHNhscpg0003596 −.531788057 chr 4: 172320378-172320459 934,465 51166 AADAT
UHNhscpg0001705 −.526787621 chr 15: 99009623-99010314 2,859 140460 ASB7
UHNhscpg0009822 −.526562678 chr 1: 21855364-21855679 370 AK026930
UHNhscpg0000063 −.52421876 chr 3: 72584222-72584350 5,758 23429 RYBP
UHNhscpg0001205 −.521667613 chr 17: 38793230-38793666 8,954 AK128207
UHNhscpg0009465 −.518509703 chr 5: 92982058-92982196 0 83989 DKFZP564D172
UHNhscpg0009804 −.517599705 chr 6: 95040381-95040442 854,395 2045 EPHA7d
UHNhscpg0010111 −.516980672 chr 3: 45163070-45163300 152 64866 CDCP1
UHNhscpg0008321 −.51607039 chr 4: 32393339-32393439 1,572,342 5099 PCDH7
UHNhscpg0006596 −.515801694 chr 12: 6667579-6668374 0 171017 ZNF384c
UHNhscpg0007045 −.514160426 chr 6: 39190 376-39191144 0 55776 C6orf64
UHNhscpg0003064 −.513774745 chr 15: 50863986-50864266 0 3175 ONECUT1
UHNhscpg0008779 −.512617631 chr 12: 64004487-64004759 0 253827 LOC253827
UHNhscpg0002807 −.510358672 chr 9: 91266376-91266791 859 4783 NFIL3
UHNhscpg0007252 −.510001953 chr 13: 110249836-110250880 68,680 283487 LOC283487
UHNhscpg0008979 −.509333714 chr 3: 97915795-97915891 100,433 AY358738
UHNhscpg0002130 −.508146229 chr 20: 61676052-61676691 6,181 85441 PRIC285
UHNhscpg0000750 −.506824133 chr 11: 111449826-111451103 0 55216 FLJ10726
UHNhscpg0004733 −.506433015 chr 11: 77963050-77963233 0 79731 FLJ23441
UHNhscpg0007997 −.504269038 chr 11: 19691578-19692280 0 89797 AJ488207
UHNhscpg0011253 −.503229452 chr 5: 5123770-5123955 111,307 170690 ADAMTS16
UHNhscpg0001019 −.502788473 chr 17: 38793230-38793666 8,954 AK128207
UHNhscpg0000830 −.502263623 chr 20: 11257478-11257784 588,782 22903 BTBD3
UHNhscpg0008888 −.501752931 chr 14: 46575274-46575377 0 161357 MAMDC1c
UHNhscpg0005027 −.501245356 chr 10: 127671190-127671371 0 92565 AY251163
UHNhscpg0008252 .50313828 chr X: 24795508-24795821 1,997 170302 ARXc
UHNhscpg0005849 .505284858 chr 9: 69169771-69170443 3,351 9413 C9orf61
UHNhscpg0002396 .505405308 chr 9: 15499859-15499960 0 11168 PSIP1
UHNhscpg0000331 .505543224 chr1: 114065861-114066820 0 54665 FLJ11220
UHNhscpg0004028 .505850764 chr 6: 109920727-109920873 0 FLJ25791
UHNhscpg0003238 .508910182 chr 5: 72642966-72643484 134,358 2297 FOXD1
UHNhscpg0005599 .512086932 chr 11: 57161641-57162347 6,789 219539 YPEL4
UHNhscpg0004696 .515663002 chr 2: 26012699-26013466 0 55252 ASXL2
UHNhscpg0008470 .516009324 chr 1: 225950806-225950903 0 55746 NUP133
UHNhscpg0008340 .51741056 chr 4: 84313172-84313686 0 51138 COPS4
UHNhscpg0003990 .517872516 chr 12: 43376666-43376983 0 4753 NELL2c
UHNhscpg0008557 .518846707 chr 10: 239933-240068 0 10771 ZMYND11
UHNhscpg0000482 .520984085 chr 11: 85649369-85649478 0 8726 EEDe
UHNhscpg0005884 .520992457 chr 3: 128381578-128381626 13,045 285311 AK097460
UHNhscpg0008792 .521754696 chr 4: 145190267-145191203 5,950 2996 GYPE
UHNhscpg0009520 .525317277 chr 1: 91678271-91678520 0 8317 CDC7d
UHNhscpg0004355 .526505907 chr 6: 27464330-27464706 0 441136 AK092633
UHNhscpg0001611 .526967248 chr 6: 30289787-30290357 683 7726 TRIM26
UHNhscpg0004783 .529777441 chr 22: 15638898-15638988 0 150165 MGC57211
UHNhscpg0000025 .532588588 chr 10: 75370203-75371061 22,943 5328 PLAUd
UHNhscpg0005928 .535021909 chr 1: 212554059-212554157 0 7399 USH2A
UHNhscpg0001828 .537335195 chr 17: 17507093-17507808 17,703 10743 RAI1
UHNhscpg0005479 .543975527 chr 1: 215895774-215895935 122,221 127018 LYPLAL1
UHNhscpg0002565 .545509304 chr 6: 116998748-116999090 1,641 51389 RWDD1
UHNhscpg0008258 .545922515 chr 1: 114408830-114409330 316 148281 SYT6
UHNhscpg0010487 .547254207 chr 12: 92273678-92274142 234 11163 NUDT4
UHNhscpg0002717 .55323384 chr 12: 48302621-48302970 649 AK123353
UHNhscpg0002673 .553941933 chr 15: 81825124-81825456 80,654 646 BNC1
UHNhscpg0010939 .554017064 chr 10: 8108807-8109019 23,399 FLJ45983
UHNhscpg0001474 .557227088 chr 8: 53488737-53489332 3,881 9705 ST18d
UHNhscpg0008206 .559375672 chr 14: 89155480-89155723 41,909 29018 AF118074
UHNhscpg0004409 .560612707 chr 12: 63850471-63850714 0 23592 MAN1
UHNhscpg0005280 .566882321 chr 8: 114808371-114808497 289,953 114788 CSMD3
UHNhscpg0002623 .566952142 chr 12: 14237814-14238207 171,686 55729 BC063855e
UHNhscpg0003738 .567376726 chr 2: 88155376-88155675 10,310 51315 LOC51315
UHNhscpg0008444 .570746223 chr 10: 122728932-122729159 69,907 55717 WDR11d
UHNhscpg0007259 .575414924 chr 1: 208139197-208139388 390 7779 SLC30A1
UHNhscpg0002607 .582792699 chr 2: 26481086-26481443 0 165082 GPR113
UHNhscpg0008656 .58347414 chr 1: 115293188-115293360 4,205 7252 TSHB
UHNhscpg0002406 .584415421 chr 18: 48120746-48121468 0 1630 DCCd
UHNhscpg0009002 .5849705 chr 16: 78361983-78362481 169,871 4094 MAFd
UHNhscpg0007649 .586330872 chr 14: 80296231-80296366 0 145508 C14orf145
UHNhscpg0004597 .587453741 chr 22: 15638898-15638988 0 MGC57211
UHNhscpg0003289 .613126037 chr 14: 20640986-20641802 4,239 554207 BC031469
UHNhscpg0002376 .616193621 chr 18: 33116047-33117280 0 56853 BRUNOL4
UHNhscpg0002145 .617261027 chr 1: 116672902-116673528 13,466 476 ATP1A1
UHNhscpg0000928 .628741946 chr 18: 32114987-32115360 12,305 55034 MOCOS
UHNhscpg0008601 .636604373 chr 19: 40897102-40898011 0 27033 TZFPe
UHNhscpg0002312 .640025401 chr 12: 52959901-52960341 457 3178 HNRPA1
UHNhscpg0004507 .640711129 chr 2: 80187757-80187860 0 1496 CTNNA2c
UHNhscpg0002864 .644197159 chr 20: 20293918-20294056 2,708 3642 INSM1e
UHNhscpg0008280 .693689486 chr 3: 111231569-111231663 692,505 55211 DPPA4e
UHNhscpg0003180 .698353684 chr 2: 45078887-45079081 1,606 6496 SIX3

Note.— Individuals were ordered by increasing age, and gene-specific DNA methylation dynamics were investigated using the individual ages (sperm DNA–HpaII age range 24–56 years) as a covariate.

a

Negative score = increasing methylation with respect to age. Positive score = decreasing methylation with respect to age.

b

chr = chromosome.

c

Genes related to brain/neuronal development.

d

Genes related to cancer or other disease.

e

Genes related to spermatogenesis, embryogenesis, and development.