TABLE 2.
Structural assignments for the major molecular ions from negative-ion MALDI-LIN-TOF mass spectra of de-O-acylated LPS from E. coli F470 and F470(pWQ152)b
Observed mass (m/z) | Structural assignmenta | Theoretical mass (m/z) | Present in:
|
|
---|---|---|---|---|
F470 | F470 (pWQ152) | |||
3,143.1 | (lipidA-Hy37)-Kdo2-Hep3-Hex5-HexN-P-PEtN | 3,143.8 | + | + |
3,062.6 | (lipidA-Hy37)-Kdo2-Hep3-Hex5-P2-PEtN | 3,062.6 | + | + |
3,020.3 | (lipidA-Hy37)-Kdo2-Hep3-Hex5-P3 | 3,019.5 | + | + |
(lipidA-Hy37)-Kdo2-Hep3-Hex5-HexN-P | 3,020.7 | |||
2,939.5 | (lipidA-Hy37)-Kdo2-Hep3-Hex5-P2 | 2,939.5 | + | + |
2,859.6 | (lipidA-Hy37)-Kdo2-Hep3-Hex5-P | 2,859.6 | + | + |
2,796.9 | (lipidA-Hy37)-Kdo3-Hep3-Hex2-P2-PEtN | 2,796.5 | − | + |
(lipidA-Hy37)-Kdo3-Hep3-Hex3-PEtN | 2,798.7 | |||
2,778.0 | (lipidA-Hy37)-Kdo2-Hep3-Hex4-P2 | 2,777.5 | − | + |
2,754.4 | (lipidA-Hy37)-Kdo3-Hep3-Hex2-P3 | 2,753.4 | − | + |
(lipidA-Hy37)-Kdo3-Hep3-Hex3-P1 | 2,755.6 | |||
2,673.6 | (lipidA-Hy37)-Kdo3-Hep3-Hex2-P2-PEtN2 | 2,673.4 | − | + |
2,655.6 | (lipidA-Hy37)-Kdo2-Hep3-Hex2-P3-PEtN | 2,656.3 | − | + |
2,576.0 | (lipidA-Hy37)-Kdo2-Hep3-Hex2-P2-PEtN | 2,576.3 | − | + |
2,452.8 | (lipidA-Hy37)-Kdo2-Hep3-Hex2-P2 | 2,453.2 | − | + |
lipidA-Hy37 refers to the de-O-acylated lipid A backbone with the structure (GlcN-C14:0-OH)2.
Data are shown in Fig. 6.