Table 2.
(Fig. 2) |
(Fig. 3) |
(Fig. 4) |
(Fig. 6) |
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Nikonov et al. Parameters |
Optimized |
Optimized, τE* = 2 s |
"Modern" parameters |
|||||||||
Parameters | Value | Lower bound | Upper bound | Value | Lower bound | Upper bound | Value | Lower bound | Upper bound | Value | Lower bound | Upper bound |
"Front-End" Parameters | ||||||||||||
τR* | 0.43 | 0.351 | 0.1 | 0.99 | 0.17 | 0.050 | 0.49 | 0.49 | 0.050 | 0.49 | ||
τE* | 1.4 | 1.051 | 1 | 4 | 2 | 1.292 | 1 | 3 | ||||
νRP | 6565.8 | 100 | 20000 | 1916.8 | 100 | 20000 | 2567.6 | 100 | 20000 | 5602 | 100 | 20000 |
R*(0) | 0 | 0 | 0 | 0 | ||||||||
E*(0) | 0 | 0 | 0 | 0 | ||||||||
Ca2+, Ca2+-Buffer Parameters | ||||||||||||
Cdark | 0.385 | 0.250 a | 0.553 a | 0.625 a | ||||||||
Jex,sat | 18.638 | 26.78 | 4 | 40 | 14.08 | 4 | 40 | 23.17 | 4 | 40 | ||
Jex,ss | 3.618 | 3.615 a | 3.615 | 6.507 | ||||||||
Kex | 1.6 | 1.6 | 1.6 | 1.6 | ||||||||
Fca | 0.1 | 0.1 | 0.1 | 0.18 | ||||||||
Bca | 15 | 11.74 | 10 | 200 | 55.32 | 2 | 200 | 2 | 2 | 200 | ||
Vcyto | 1 × 10−12 | 1 × 10−12 | 1 × 10−12 | 1 × 10−12 | ||||||||
F | 96487 | 96487 | 96487 | 96487 | ||||||||
fse | 1 | 1 | 1 | 1 | ||||||||
cGMP, Cyclase Parameters | ||||||||||||
Kc | 0.1 | 0.0842 | 0.08 | 0.24 | 0.208 | 0.08 | 0.22 | 0.2 | 0.2 | 0.24 | ||
nca | 2 | 2 | 2.714 | 1 | 4 | 2 | ||||||
Amax | 30 | 3.254 a | 4.034 a | 17.22 a | ||||||||
βsub | 1.9 × 10−5 | 1.9 × 10−5 | 1.9 × 10−5 | 1.9 × 10−5 | ||||||||
gdark | 2 | 2 | 2 | 2 | ||||||||
βd | 0.948 | 0.166 | 0.1 | 2 | 0.133 | 0.1 | 4 | 0.8 | 0.8 | 1.2 | ||
cGMP-Gated Channel, Photocurrent Parameters | ||||||||||||
ncg | 2 | 2 | 1.5 | 1.5 | 3.5 | 2 | ||||||
Jd | 72.296 | 72.296 | 72.296 | 72.296 | ||||||||
Fdark | 1 | 1 | 1 | 1 | ||||||||
Rel Err | 0.0226 | 0.00311 | 0.00696 | 0.01257 |
Roaming steady-state parameter.