Table 6.
Comparison of zebrafish follicle transcript occurrence of proteins identified by proteomic analysis, with the corresponding protein repertoire deduced from transcripts expressed at over 0.15% of the mRNA population in human ovary cDNA libraries
Zebrafish* | Human** | Human gene | Protein name | Zebrafish | Human | ||||
SAGE | ID.9767 | ID.15519 | ID.4908 | ID.5611 | ID.10552 | ||||
Dr.1109 | Hs.520640 | ACTB | Beta-actin | 0.822 | 0.317 | 0.752 | 0.404 | 0.503 | 0.535 |
Dr.25213 | Hs.520640 | ACTB | Beta-actin | 0.393 | 0.326 | 0.698 | 0.404 | 0.503 | 0.535 |
Dr.729 | Hs.446149 | LDHB | Lactate dehydrogenase B | 0.411 | 0.035 | 0.046 | 0.210 | 0.140 | 0.197 |
Dr.5605 | Hs.433615 | TUBB2 | Tubulin, beta, 2 | 0.193 | 0.290 | 0.852 | 0.194 | 0.140 | 0.159 |
Dr.11308 | Hs.448226 | RPLP0 | Ribosomal protein, large, P0 | 0.171 | 0.079 | 0.023 | 0.381 | 0.199 | 0.384 |
Dr.30628 | Hs.544577 | GAPDH | Glyceraldehyde-3-phos. dehydro. | 0.145 | 0.096 | 0.116 | 1.105 | 1.018 | 0.816 |
Dr.5705 | Hs.546286 | RPS3 | Ribosomal protein S3 | 0.127 | 0.017 | 0.008 | 0.708 | 0.889 | 0.356 |
0Dr.18315 | Hs.444467 | EEF1G | Elongation factor 1-gamma | 0.101 | 0.052 | 0.089 | 0.700 | 0.304 | 0.525 |
Dr.28241 | Hs.558380 | RPL7A | Ribosomal protein L7a | 0.011 | 0.088 | 0.004 | 0.591 | 0.081 | 0.366 |
Dr.1065 | Hs.558354 | RPSA | Ribosomal protein SA | 0.003 | 0.088 | 0.008 | 0.342 | 0.187 | 0.103 |
Dr.7952 | Hs.198281 | PKM2 | Pyruvate kinase, muscle | 0.003 | 0 | 0.017 | 1.035 | 0.374 | 0.657 |
Dr.4724 | Hs.517145 | ENO1 | Enolase 1 | 0.003 | 0 | 0 | 2.023 | 0.573 | 0.582 |
*Zebrafish UniGene Build#87. **Human UniGene Build#187. The values indicated are the percentages of species specific UniGene clusters as evaluated by the percentages of corresponding tags or EST counts in the mRNA population identified in ZEBRAOV SAGE tag database and dbEST libraries. Percentages at over 0.15% were bolded.