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. 2000 May;11(5):1887–1903. doi: 10.1091/mbc.11.5.1887

Table 3.

Summary of mutations

tub1 allele Amino acid substitutions DNA sequence changesa Diagnostic restriction sites Phenotypeb
801 R2A, E3A GCTGCA Gain PstI Cs, Ts, BenSS
AGAGAA
802 E27A, H28A GCAGCC Gain BbvI RL
GAGCAC
803 K31A, D33A GCGCCGGCT Gain HinP1I, BenSS
AAGCCGGAT  Lose BsaBI
804 H35A, E37A, D38A GCTCTAGCAGCT Gain PvuII, BenSS
CATCTAGAAGAT  Lose BsaBI
805 K42A, K44A GCGCCGGCG Gain HinP1I BenSS
AAGCCGAAG
806 E47A, E48A GCAGCT Gain PvuII BenR
GAAGAG
807 H55A, E56A GCTGCA Gain BbvI BenSS
CATGAA
808 K61A, R65A GCGTTCGTTCCAGCT Gain PvuII RL
AAGTTCGTTCCAAGG
809 D70A, E72A GCTTTAGCG Gain HinP1I Slow growth,
GATTTAGAG  BenSS
810 D77A, E78A, R80A GCAGCAGTCGCT Gain BbvI BenSS
GACGAAGTCCGT
811 K85A, D86A GCTGCC Gain BbvI WT
AAGGAC
812 H89A, E91A GCTCCAGCA Gain BpmI BenSS
CATCCAGAA
813 K97A, E98A, D99A GCGGCGGCC Gain NotI Slow growth,
AAGGAGGAC  BenSS
814 R106A, H108A GCTGGCGCT Gain PvuII Slow growth,
AGAGGCCAT  BenSS
815 R113A, E114A GCAGCA Gain BbvI WT
AGAGAA
816 D118A, D121A, R122A GCTGTTCTGGCTGCG Gain BbvI Cs, BenSS
GATGTTCTGGATAGG
817 R124A, K125A GCAGCA Gain BbvI BenSS
AGAAAA
818 D128A, D131A GCCCAATGTGCA Gain BsgI Cs, BenSS
GACCAATGTGGAT
819 T146A GCA Gain BsgI, BenSS
ACT  BspMI
820 E156A, E157A GCAGCA Gain BbvI DL
GAAGAA
821 E161A, K164A, K165A GCATACGGTGCGGCA Gain Fnu4HI BenSS
GAATACGGTAAGAAA
822 K167A, E169A GCGCTGGCA Gain HinP1I Slow growth,
AAGCTGGAA  BenSS
823 E197A, H198A, D200A GCAGCTGCAGCT Gain PstI, PvuII RL
GAACATGCAGAT
824 D206A, E208A GCGAATGCG Gain NruI, Cs, BenSS
GATAATGAG  BsmI
825 D212A, K215A, R216A GCCATGTGCGCAGCA Gain BbvI BenR
GACATGTGCAAAAGA
826 D219A, R222A GCTATCCCAGCA Lose EcoRV BenR
GATATCCCAAGA
827 R244A, D246A GCATTCGCG Gain BstUI Slow growth,
AGATTCGAG  BenSS
828 D252A, E255A GCTTTGAACGCG Gain MluI DL
GATTTGAACGAA
829 R265A, H267A GCAATTGCT Gain MunI, Slow growth,
AGAATTCAT  Lose EcoRI  BenSS
830 K279A, K281A GCATCAGCT Gain PvuII BenSS
AAATCAAAG
831 H284A, E285A GCTGCG Gain Fnu4HI, Cs, BenSS
CATGAG  Lose HinfI, PleI
832 K305A, D307A GCGTGTGCA Gain ApaLI BenR
AAGTGTGAT
833 R309A, D310A, K312A GCAGCTGGTGCA Gain PvuII, BenSS
AGAGATGGTAAA Fnu4HI
834 R321A, D323A GCGGGTGCT Gain BstUI Slow growth,
AGGGGTGAT  BenSS
835 R327A, D328A, GCTGTTCAAGCA Gain PvuII WT
 R331A GATGTTCAAAGA
836 E334A, K337A GCGCAGGTGGCA Gain BstUI, Cs, Ts, BenSS
GAGCAGGTGAAA  HinP1I
837 K339A, K340A GCGGCG Gain Fnu4HI, BenSS
AAGAAG  BstUI, Lose  BbsI
838 D373A, R374A GCTGCA Gain PstI, SfcI BenSS
GATAGG
839 E387A, K390A, R391A GCAGCTTGGGCGGCA Gain PstI BenR
GAGGCTTGGAAGAGA
840 D393A, R394A, K395A, D397A GCTGCAGCATTCGCT Gain PstI, RL
GATAGAAAATTCGAT BsmI, SfcI,  Lose ClaI
841 D393A, R394A GCTGCA Gain PstI BenR
GATAGA
842 K395A, D397A GCATTCGCT Gain BsmI Cs, Ts, BenSS
AAATTCGAT
843 K395A GCA Gain BsmI WT
AAA
844 D397A GCA Gain AseI BenSS
GAT
845 K402A, R403A GCAGCT Gain PvuII Slow growth, BenSS
AAACGT  BenSS
846 E412A, E415A GCAGGTATGGCA Gain BsgI, Cs, Ts, BenSS
GAAGGTATGGAA  BspMI
847 E416A, E418A GCAGGTGCA Gain BsmI, Slow growth,
GAAGGTGAA  BspMI, Lose  EcoRI  BenSS
848 E421A, R423A, GCAGCTGCAGCAGCT Gain PstI, PvuII Slow growth,
 E424A, D425A GAAGCTAGAGAAGAT  BenSS
849 E430A, R431A, D432A GCTGCAGCT Gain PstI Slow growth,
GAAAGAGAT  BenSS
850 E435A, D439A GCGGTGGGTGCCGCC Gain BstUI BenSS
GAAGTGGGTGCCGAC
851 E443A, E444A, E445A, GCTGCAGCGGCA Gain PstI BenSS
 E446A GAGGAAGAGGAA
852 F447A GCT Gain HindIII BenSS
TTT
853 E184A GCG Gain HinP1I Slow growth,
GAG  BenSS
a

The mutant sequence is above the corresponding wild-type sequence. Altered nucleotides are in bold; altered codons are underlined. 

b

BenR, benomyl resistant; BenSS, benomyl supersensitive; Cs, cold-sensitive; DL, dominant lethal; RL, recessive lethal; Slow growth, impaired growth at all temperatures; Ts, heat-sensitive; WT, wild-type.