Table 3.
tub1 allele | Amino acid substitutions | DNA sequence changesa | Diagnostic restriction sites | Phenotypeb |
---|---|---|---|---|
801 | R2A, E3A | GCTGCA | Gain PstI | Cs, Ts, BenSS |
AGAGAA | ||||
802 | E27A, H28A | GCAGCC | Gain BbvI | RL |
GAGCAC | ||||
803 | K31A, D33A | GCGCCGGCT | Gain HinP1I, | BenSS |
AAGCCGGAT | Lose BsaBI | |||
804 | H35A, E37A, D38A | GCTCTAGCAGCT | Gain PvuII, | BenSS |
CATCTAGAAGAT | Lose BsaBI | |||
805 | K42A, K44A | GCGCCGGCG | Gain HinP1I | BenSS |
AAGCCGAAG | ||||
806 | E47A, E48A | GCAGCT | Gain PvuII | BenR |
GAAGAG | ||||
807 | H55A, E56A | GCTGCA | Gain BbvI | BenSS |
CATGAA | ||||
808 | K61A, R65A | GCGTTCGTTCCAGCT | Gain PvuII | RL |
AAGTTCGTTCCAAGG | ||||
809 | D70A, E72A | GCTTTAGCG | Gain HinP1I | Slow growth, |
GATTTAGAG | BenSS | |||
810 | D77A, E78A, R80A | GCAGCAGTCGCT | Gain BbvI | BenSS |
GACGAAGTCCGT | ||||
811 | K85A, D86A | GCTGCC | Gain BbvI | WT |
AAGGAC | ||||
812 | H89A, E91A | GCTCCAGCA | Gain BpmI | BenSS |
CATCCAGAA | ||||
813 | K97A, E98A, D99A | GCGGCGGCC | Gain NotI | Slow growth, |
AAGGAGGAC | BenSS | |||
814 | R106A, H108A | GCTGGCGCT | Gain PvuII | Slow growth, |
AGAGGCCAT | BenSS | |||
815 | R113A, E114A | GCAGCA | Gain BbvI | WT |
AGAGAA | ||||
816 | D118A, D121A, R122A | GCTGTTCTGGCTGCG | Gain BbvI | Cs, BenSS |
GATGTTCTGGATAGG | ||||
817 | R124A, K125A | GCAGCA | Gain BbvI | BenSS |
AGAAAA | ||||
818 | D128A, D131A | GCCCAATGTGCA | Gain BsgI | Cs, BenSS |
GACCAATGTGGAT | ||||
819 | T146A | GCA | Gain BsgI, | BenSS |
ACT | BspMI | |||
820 | E156A, E157A | GCAGCA | Gain BbvI | DL |
GAAGAA | ||||
821 | E161A, K164A, K165A | GCATACGGTGCGGCA | Gain Fnu4HI | BenSS |
GAATACGGTAAGAAA | ||||
822 | K167A, E169A | GCGCTGGCA | Gain HinP1I | Slow growth, |
AAGCTGGAA | BenSS | |||
823 | E197A, H198A, D200A | GCAGCTGCAGCT | Gain PstI, PvuII | RL |
GAACATGCAGAT | ||||
824 | D206A, E208A | GCGAATGCG | Gain NruI, | Cs, BenSS |
GATAATGAG | BsmI | |||
825 | D212A, K215A, R216A | GCCATGTGCGCAGCA | Gain BbvI | BenR |
GACATGTGCAAAAGA | ||||
826 | D219A, R222A | GCTATCCCAGCA | Lose EcoRV | BenR |
GATATCCCAAGA | ||||
827 | R244A, D246A | GCATTCGCG | Gain BstUI | Slow growth, |
AGATTCGAG | BenSS | |||
828 | D252A, E255A | GCTTTGAACGCG | Gain MluI | DL |
GATTTGAACGAA | ||||
829 | R265A, H267A | GCAATTGCT | Gain MunI, | Slow growth, |
AGAATTCAT | Lose EcoRI | BenSS | ||
830 | K279A, K281A | GCATCAGCT | Gain PvuII | BenSS |
AAATCAAAG | ||||
831 | H284A, E285A | GCTGCG | Gain Fnu4HI, | Cs, BenSS |
CATGAG | Lose HinfI, PleI | |||
832 | K305A, D307A | GCGTGTGCA | Gain ApaLI | BenR |
AAGTGTGAT | ||||
833 | R309A, D310A, K312A | GCAGCTGGTGCA | Gain PvuII, | BenSS |
AGAGATGGTAAA | Fnu4HI | |||
834 | R321A, D323A | GCGGGTGCT | Gain BstUI | Slow growth, |
AGGGGTGAT | BenSS | |||
835 | R327A, D328A, | GCTGTTCAAGCA | Gain PvuII | WT |
R331A | GATGTTCAAAGA | |||
836 | E334A, K337A | GCGCAGGTGGCA | Gain BstUI, | Cs, Ts, BenSS |
GAGCAGGTGAAA | HinP1I | |||
837 | K339A, K340A | GCGGCG | Gain Fnu4HI, | BenSS |
AAGAAG | BstUI, Lose BbsI | |||
838 | D373A, R374A | GCTGCA | Gain PstI, SfcI | BenSS |
GATAGG | ||||
839 | E387A, K390A, R391A | GCAGCTTGGGCGGCA | Gain PstI | BenR |
GAGGCTTGGAAGAGA | ||||
840 | D393A, R394A, K395A, D397A | GCTGCAGCATTCGCT | Gain PstI, | RL |
GATAGAAAATTCGAT | BsmI, SfcI, Lose ClaI | |||
841 | D393A, R394A | GCTGCA | Gain PstI | BenR |
GATAGA | ||||
842 | K395A, D397A | GCATTCGCT | Gain BsmI | Cs, Ts, BenSS |
AAATTCGAT | ||||
843 | K395A | GCA | Gain BsmI | WT |
AAA | ||||
844 | D397A | GCA | Gain AseI | BenSS |
GAT | ||||
845 | K402A, R403A | GCAGCT | Gain PvuII | Slow growth, BenSS |
AAACGT | BenSS | |||
846 | E412A, E415A | GCAGGTATGGCA | Gain BsgI, | Cs, Ts, BenSS |
GAAGGTATGGAA | BspMI | |||
847 | E416A, E418A | GCAGGTGCA | Gain BsmI, | Slow growth, |
GAAGGTGAA | BspMI, Lose EcoRI | BenSS | ||
848 | E421A, R423A, | GCAGCTGCAGCAGCT | Gain PstI, PvuII | Slow growth, |
E424A, D425A | GAAGCTAGAGAAGAT | BenSS | ||
849 | E430A, R431A, D432A | GCTGCAGCT | Gain PstI | Slow growth, |
GAAAGAGAT | BenSS | |||
850 | E435A, D439A | GCGGTGGGTGCCGCC | Gain BstUI | BenSS |
GAAGTGGGTGCCGAC | ||||
851 | E443A, E444A, E445A, | GCTGCAGCGGCA | Gain PstI | BenSS |
E446A | GAGGAAGAGGAA | |||
852 | F447A | GCT | Gain HindIII | BenSS |
TTT | ||||
853 | E184A | GCG | Gain HinP1I | Slow growth, |
GAG | BenSS |
The mutant sequence is above the corresponding wild-type sequence. Altered nucleotides are in bold; altered codons are underlined.
BenR, benomyl resistant; BenSS, benomyl supersensitive; Cs, cold-sensitive; DL, dominant lethal; RL, recessive lethal; Slow growth, impaired growth at all temperatures; Ts, heat-sensitive; WT, wild-type.