TABLE 3.
Best matches in the GenBank database for the dominant Rieske clone families in the naphthalene, phenanthrene, and pyrene enrichments and the unamended creosote-contaminated soil libraries
| Clone family | BlastN result
|
BlastP result
|
||||
|---|---|---|---|---|---|---|
| Accession no. | % Identity | Name | Accession no. | % Identity | Name | |
| S1 | AY194931 | 98 | nagAc | AAP30901 | 100 | NagAc |
| S2 | X72850 | 65 | dxnA1 | CAA51365 | 60 | DxnA1 |
| S3 | DQ167474 | 100 | nahAc | AAA25902 | 100 | G7 NahAc |
| NP1 | AF491307 | 100 | NCIB9816-4 nahAc | AAO64274 | 100 | NCIB9816-4 NahAc |
| NP2 | DQ167474 | 100 | nahAc | AAA25902 | 100 | G7 NahAc |
| NP3 | AY194931 | 100 | nagAc | AAP30901 | 100 | NagAc |
| PH1 | AY502075 | 63 | akbA1a | AAR90131 | 66 | DK17 AkbA1a |
| PH2 | AY502075 | 74 | akbA1a | AAR90131 | 86 | DK17 AkbA1a |
| PH3 | AF380367 | 100 | dbtAc | AAK62353 | 100 | DbtAc |
| PH4 | AF079317 | 74 | bphA1a | AAD03980 | 80 | BphA1a |
| PH5 | AY194931 | 100 | nagAc | AAP30901 | 100 | NagAc |
| PY1 | AY502075 | 63 | akbA1a | AAR90131 | 66 | DK17 AkbA1a |
| PY2 | AF079317 | 74 | bphA1a | AAD03980 | 73 | BphA1a |
| PY3 | AY502075 | 74 | akbA1a | AAR90131 | 80 | DK17 AkbA1a |