TABLE 2.
Characteristics of the 25 ORFs on VPAI of V. parahaemolyticus O3:K6
| ORF | Length of protein (amino acids) | Homology as determined by BLASTP search | Amino acid identity (%) | E value |
|---|---|---|---|---|
| VP0379 | 267 | ABC-type metal ion transport system, periplasmic component/surface antigen (Rhodospirillum rubrum) | 48 | 9e-51 |
| VP0380 | 455 | Phage integrase (Polaromonas sp. strain JS666) | 25 | 3e-29 |
| VP0381 | 33 | No significant match | ||
| VP0382 | 263 | Metallophosphoesterase (Shewanella amazonensis SB2B) | 25 | 2e-11 |
| VP0383 | 179 | Hypothetical protein plu3931 (Photorhabdus luminescens subsp. laumondii TTO1) | 58 | 2e-47 |
| VP0384 | 95 | Hypothetical protein (Dictyostelium discoideum) | 25 | 0.14 |
| VP0385 | 39 | No significant match | ||
| VP0386 | 245 | Putative inner membrane protein (Salmonella enterica serovar Typhimurium LT2) | 60 | 3e-81 |
| VP0387 | 583 | Type I restriction specificity (S) subunit (Vibrio vulnificus CMCP6) | 45 | 8e-98 |
| VP0388 | 496 | Type I restriction DNA methylase (M) subunit (Vibrio vulnificus CMCP6) | 99 | 0.0 |
| VP0389 | 132 | Hypothetical protein VV12032 (Vibrio vulnificus CMCP6) | 92 | 3e-49 |
| VP0390 | 36 | Hypothetical protein MG00497.4 (Magnaporthe grisea 70-15) | 42 | 3.3 |
| VP0391 | 49 | Hypothetical protein VFA0532 (Vibrio fischeri ES114) | 61 | 4e-08 |
| VP0392 | 121 | Translation elongation factor Ts (Vibrio vulnificus CMCP6) | 94 | 3e-52 |
| VP0393 | 94 | ORF23 (Vibrio cholerae) | 83 | 5e-40 |
| VP0394 | 221 | Putative DNA methyltransferase X64097 (Vibrio cholerae)a | 72 | 2e-101 |
| VP0395 | 814 | Type I restriction enzyme (Vibrio vulnificus CMCP6) | 97 | 0.0 |
| VP0396 | 61 | Hypothetical protein ENSANGP00000010383 (Anopheles gambiae strain PEST) | 31 | 9.7 |
| VP0397 | 33 | No significant match | ||
| VP0398 | 385 | Hypothetical protein VV12042 (Vibrio vulnificus CMCP6) | 24 | 3e-23 |
| VP0399 | 54 | Putative transcriptional regulator (Vibrio vulnificus CMCP6) | 61 | 4e-09 |
| VP0400 | 271 | DNA topoisomerase I:restriction endonuclease (Polaromonas sp. strain JS666) | 36 | 1e-37 |
| VP0401 | 529 | Conserved hypothetical protein (Nitrosomonas eutropha C71) | 23 | 7e-17 |
| VP0402 | 473 | Hypothetical protein lpp1915 (Legionella pneumophila strain Paris) | 38 | 2e-75 |
| VP0403 | 111 | Hypothetical protein lpg1935 (Legionella pneumophila subsp. pneumophila strain Philadelphia 1) | 31 | 1e-06 |
a
The identity of the putative X64097 protein is based on the analysis described in this study.