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. 2006 Jun;72(6):3814–3825. doi: 10.1128/AEM.00119-06

FIG. 6.

FIG. 6.

Homologous regions around the YBT locus in P. syringae pv. tomato DC3000, P. syringae pv. syringae B728a, and P. syringae pv. phaseolicola 1448A and GC contents (P. syringae pv. tomato DC3000). Homologous regions are represented by rectangles; the YBT loci and the adjacent gene PSPTO2607 (DC3000) or PSPPH2892 (1448A) are black coded. Nonhomologous regions are shown either by a dark line when homologous proteins were found elsewhere in the genome of another strain or by a gray line when homologous proteins were not found anywhere in the genome of either of the other strains. The dotted line represents a gap. Homologous regions were determined by comparing protein or gene sequences using SSearch, BLASTP, or BLASTN and by comparing gene positions; protein homologies observed were higher than 80% identity. The last left and right genes represented that have a homologue in the same area in another pathovar are PSPTO2573 and PSPTO2609 (DC3000), Psyr_2264 and Psyr_2289 (B728a), and PSPPH2922 and PSPPH2887 (1448A); in 1448A, PSPPH2923 is an IS801 transposase.