TABLE 3.
Similarity search between P. syringae and Y. pestis or P. luminescens proteins
| Proteina (aab) of P. syringae DC3000 | Proposed new name | Homologous proteina (aab) of Y. pestis 91001 | % Identity-% similarity (amino acid overlap)c | Homologous proteina (aab) of P. luminescens TTO1 | % Identity-% similarity (amino acid overlap)c |
|---|---|---|---|---|---|
| PchA (469) | YbtS (434) | 27.6-52.9 (420) | Plu2324 (977) | 27.3-53.4 (457) | |
| Irp5 (522) | YbtE (525) | 57.5-81.0 (515) | Plu2324 (977) | 56.4-79.2 (514) | |
| Irp4 (271) | YbtT (267) | 50.8-71.0 (238) | Plu2323 (258) | 52.8-74.4 (250) | |
| Irp3 (360) | YbtU (386) | 49.9-72.9 (343) | Plu2322 (365) | 46.0-72.3 (361) | |
| HMWP1 (3,173) | HMWP1 (3,163) | 52.6-76.0 (3,187) | Plu2321 (3,908) | 41.3-62.8 (3,211) | |
| PSPTO2601 (408) | Irp8 | YbtX (467) | 29.2-60.1 (404) | Plu2317 (414) | 30.7-62.1 (378) |
| PSPTO2602 (2,057) | HMWP2 | HMWP2 (2,041) | 52.3-74.2 (2,045) | Plu2320 (2,049) | 51.2-74.6 (2,053) |
| PSPTO2603 (581) | Irp7 | YbtQ (600) | 33.1-65.8 (564) | Plu2319 (600) | 34.2-65.6 (582) |
| PSPTO2604 (593) | Irp6 | YbtP (600) | 37.9-66.6 (578) | Plu2318 (575) | 38.8-68.0 (557) |
| PSPTO2605 (685) | FyuA | FyuA (673) | 32.2-61.7 (652) | Plu2316 (668) | 35.3-66.4 (651) |
| PSPTO2606 (312) | YbtA | YbtA (319) | 30.8-60.9 (169) | Plu2315 (323) | 30.4-59.5 (289) |
a
Protein names accord with the annotated genomes.
b
No. of amino acids.
c
Data obtained using Ssearch.