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. 2006 Jul;74(7):4002–4013. doi: 10.1128/IAI.00257-06

TABLE 2.

N-terminal amino acid sequence of protein spots from 2-DE of F. tularensis culture filtrate proteins

Spota N-terminal sequence Best homologyb Protein name or abbreviation Calculated mass (kDa)c Calculated pIc
1 EDTTTKNDNLSPQSVDLS Catalase-peroxidase KatG 80 5.4
2 GKIIGIDLGTTNS 70-kDa chaperone DnaK 69 4.8
3 AAKQVLFSDEAR 60-kDa chaperone GroEL 57 4.9
4 MNLHEYQAKDLL Succinyl-CoA synthetase, β subunit SucC 42 5.2
5 MRVVINGFG Glyceraldehyde 3-phosphate dehydrogenase GAPDH 35 5.7
6 SKTAVVFPGQGS (Acyl carrier protein) S-melanoyltransferase FabD 33 5.0
7 SVLVDKNT Succinyl-CoA synthetase, α subunit SucC 30 6.4
8 SLPTPFI Purine-nucleoside phosphorylase DeoD 27 7.8
9 MKFELPKLPYAV Superoxide dismutase SodB 22 5.6
10 TKKVPNVTFKTR Peroxiredoxin Ahp1 20 5.1
11 MELQLEN-QEIId Bacterioferritin Bfr 17 5.6
12 MNIRPLQ 10-kDa chaperone GroES 10 5.4
a

The spot numbers correspond to those indicated in Fig. 4.

b

The protein with which the N-terminal sequence showed the best homology. Best homology is assigned on the basis of BLAST search results using the entire protein sequence. CoA, coenzyme A.

c

Mass and pI were calculated from the entire protein sequence.

d

The unidentified amino acid residue in the N-terminal sequence is indicated by a hyphen.