TABLE 1.
Hybridoma/PCR clone | Nucleotide at position in Ig heavy-chain variable region domainb:
|
||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
FWR1
|
CDR1
|
FWR2
|
CDR2
|
FWR3
|
|||||||||||
7 | 9 | 16 | 21 | 103 | 124 | 153 | 166 | 178 | 236 | 237 | 241 | 269 | 271 | 297 | |
hp-B6.1 | |||||||||||||||
1 | A | G | G | T | G | G | A | G | G | C | C | A | T | G | C |
2 | A | G | G | A | A | G | A | G | G | C | T | A | T | G | A |
3 | A | A | G | T | G | G | A | G | G | C | T | A | T | G | A |
4 | C | G | C | T | G | A | A | G | G | C | T | A | T | G | A |
5 | C | G | C | A | A | A | A | G | G | C | T | A | T | A | A |
C3.1 | C | G | G | A | A | G | T | A | A | G | T | G | C | G | C |
G11.2 | C | G | G | T | A | G | T | A | A | G | T | G | C | G | C |
VH transcripts were PCR amplified and cloned, and several clones derived from each hybridoma were selected for VH sequencing in both directions. Sequence comparisons between clones from the hp-B6.1 were compared to sequences from the C3.1 and G11.2 hybridomas. Possible point mutations from hp-B6.1 are noted by bold type. With the exception of G11.2 at position 21, C3.1 and G11.2 sequences were identical at all positions. Furthermore, the seven cloned PCR-amplified sequences from the C3.1 hybridoma were identical, and the five cloned PCR-amplified sequences from the G11.2 were identical, suggesting that, whereas the hp-B6.1 hybridoma consists of a heterogeneous cell population with respect to VH sequences, the C3.1 and G11.2 hybridomas may each be homogeneous.
Nucleotide positions are based on germ-line Ig alignment.