TABLE 2.
ORFa | Gene name | Growth on:
|
|||||
---|---|---|---|---|---|---|---|
KNO3b
|
KNO2c
|
Arginined
|
|||||
Anaerobic | Rescuee | Anaerobic | Rescue | Anaerobic | Rescue | ||
PA0520 | nirQ | − | + | − | + | + | + |
PA0523 | norC | − | + | − | + | + | + |
PA0524 | norB | − | + | − | + | + | + |
PA0525 | norD | − | + | − | + | + | + |
PA1006 | − | + | + | + | + | + | |
PA1544 | anr | − | + | − | + | − | + |
PA1546 | hemN | − | + | − | + | − | + |
PA1850 | − | + | + | + | + | + | |
PA2637 | nuoA | − | + | − | + | + | + |
PA2638 | nuoB | − | + | − | + | + | + |
PA2639 | nuoD | − | + | − | + | + | + |
PA2641 | nuoF | − | + | − | + | + | + |
PA2642 | nuoH | − | + | − | + | + | + |
PA2644 | nuoI | − | + | − | + | + | + |
PA2645 | nuoJ | − | + | − | + | + | + |
PA2646 | nuoK | − | + | − | + | + | + |
PA2648 | nuoM | − | + | − | + | + | + |
PA2649 | nuoN | − | + | − | + | + | + |
PA3164 | aroA | − | + | − | + | + | + |
PA3912 | − | + | − | + | − | + | |
PA3913 | − | + | − | + | − | + | |
PA3918 | moaC | − | + | + | + | + | + |
PA4049 | − | + | − | + | + | + | |
PA5497 | − | + | − | + | − | + |
Pseudomonas genome database designation (www.pseudomonas.com).
Anaerobic growth of mutants on KNO3 was determined by plating on LB plates containing 100 mM KNO3 and incubating under anaerobic conditions for 48 h. The wild-type strain PAO1 grows on this medium after 24 h. +, growth; −, no growth.
Anaerobic growth of mutants on KNO2 was determined by plating strains on LB plates containing 10 mM KNO2 and incubating under anaerobic conditions for 72 h. Growth of the wild-type strain PAO1 appears after 72 h. +, growth; −, no growth.
Anaerobic growth of mutants on arginine was determined by plating on LB plates containing 40 mM l-arginine and incubating under anaerobic conditions for 5 days. Growth of the wild-type strain PAO1 appears after 5 days. +, growth; −, no growth.
After anaerobic incubation with either nitrate, nitrite, or arginine, plates were then transferred to aerobic growth conditions at 37°C for a period of 24 h to determine if growth could be restored. +, growth aerobically; −, no growth aerobically.