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. 2000 Oct;12(10):1927–1938. doi: 10.1105/tpc.12.10.1927

Table 1.

Intron/Exon Splice Site Junctions in the Pea COP1 Gene

Introna Nucleotide
Positionb
5′ Donor 3′ Acceptorc
1 307–648 AAG GTTGGCTTCG ACATTTGTAG CTA
2 727–2938 AAG GTAGGTGATA CTTGAAACAG GGC
3 3094–3374 AAG GTGTGCTTGA TCATCTGTAG GTG
4 3732–4745 CAG GTTATCTTAG CTTGGTCCAG TTC
5 4905–5010 CAG GTACTACTAT ATTGAAACAG CCG
6 5076–6946 AAG GTGAGTTATT TGTATTGCAG CAT
7 7026–7785 GCG GTAAGATGGA TGCTTTTCAG GTC
8 7943–8057 AAG GTAATTGTGA CCTTTGGCAG AGT
9 8166–8482 AAG GTATTCTATA CTTTGAGCAG GTC
10 8587–8884 GCA GTATGTTCCT ATTTTTACAG GTT
11 9074–9220 CCA GTACGTAATC ATGTGTACAG GTT
12 9331–9411 AAG GTTTGTGATC TCCTTTGCAG GAA
7′ AAACCTCACC ATGd
Consensus CorGAG GTAAGT TTTTTTGCAG G
a

Introns were identified by comparing the sequence of the COP1 cDNA identified using RT-PCR with COP1 genomic DNA.

b

Nucleotide position shown is relative to start codon.

c

Splice sites underlined were not identified as boundary elements by NetPlantGene intron prediction software.

d

Sequence of 3′ boundary of intron 7′ from the COP1 gene in lip1 peas.