Table 3. Average rotation angles, Ωx, and standard deviation of the loop bases, Nx, of the final theoretical molecular models computed from the BCE curve with PDB conformation structures. Ωa is the rotation angle of Na, Ωb of Nb, Ωc of Nc and Ωd of Nd.
PDB identification | Ωa | Ωb | Ωc | Ωd |
---|---|---|---|---|
DNA | ||||
1ac7 | 39.6 (3.9) | 70.6 (2.9) | 98.6 (7.4) | –22.6 (1.6) |
1bjh | 39.3 (0.2) | 98.2 (0.1) | 1.1 (0.1) | - |
1xue | 30.9 (0.0) | 88.6 (0.0) | –0.5 (0.0) | - |
1zhu | 32.6 (0.3) | 89.7 (2.2) | 0.5 (0.6) | - |
RNA | ||||
1aud | 29.9 (33.1) | –92.7 (36.6) | 41.1 (14.7) | –40.3 (7.5) |
1b36 | 33.5 (3.8) | –57.4 (6.1) | 43.2 (3.4) | –49.2 (4.3) |
1c0o | 32.4 (1.7) | –63.6 (3.2) | 39.7 (1.2) | –44.1 (1.8) |
1hlx | 32.0 (1.9) | –53.7 (6.1) | 37.7 (1.9) | –46.4 (2.3) |