TABLE 3.
Comparison of amino acid sequences of the original viruses and their MB variantsa
Virus (genotype) | PB2 sequence at amino acid:
|
PA sequence at amino acid:
|
|||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
305 | 307 | 463 | 627 | 738 | 10 | 97 | 212 | 317 | 331 | 343 | 349 | 357 | 361 | 364 | 373 | 395 | 501 | 519 | 528 | 542 | |
HK/483/97 | E | A | I | K | K | N | T | R | W | N | A | E | T | K | S | N | S | Y | N | T | V |
HK/486/97 | E | A | I | E | K | N | T | R | W | N | A | E | T | K | S | N | S | Y | N | T | V |
Ck/HK/YU822.2/01 (A) | E | A | I | E | K | N | T | R | W | N | A | Q | T | R | S | K | S | Y | N | T | I |
Ck/HK/YU822.2/01-MB (A) | E | A | I | E | N | I | T | P | W | N | A | E | T | K | G | N | S | Y | N | T | V |
Ck/HK/YU562/01 (B)b | E | A | I | E | K | N | T | R | W | N | A | E | T | K | G | N | S | Y | N | T | V |
Ph/HK/FY155/01 (C) | E | A | V | E | K | N | T | R | W | N | T | E | T | K | G | N | G | Y | N | T | V |
Ph/HK/FY155/01-MB (C) | S | G | I | K | K | N | T | R | W | N | A | E | T | K | G | N | G | F | N | T | V |
Ck/HK/FY150/01 (D) | E | A | I | E | K | N | T | R | W | N | A | E | T | K | G | N | S | Y | S | T | V |
Ck/HK/FY150/01-MB (D) | E | A | I | E | K | N | I | R | W | N | A | E | T | K | G | N | G | Y | N | T | V |
Ck/HK/NT873.3/01 (E) | E | A | I | E | K | N | T | R | C | T | A | E | A | K | G | N | S | Y | N | S | V |
Ck/HK/NT873.3/01-MB (E) | E | A | I | E | K | N | T | R | W | N | A | E | T | K | G | N | S | Y | N | T | V |
Positions of amino acid differences observed among the original viruses and their MB variants were compared to those in phenotypes of human H5N1/97 isolates with high and low pathogenicity in mice (13) and with those in virus of genotype B, which did not infect mouse brain. HK/483/97 and HK/486/97 are phenotypes of Hong Kong 1997 viruses (13) of high and low pathogenicity, respectively, in mice. Amino acids in boldface indicate amino acid changes between original isolates and MB variants.
Virus of genotype B not isolated from mouse brain.