TABLE 1.
Primer | Coding location | Sequence (5′-3′) | Product size (bp) |
---|---|---|---|
EEE NASBA | |||
EEE 9597 | 9597-9616 | gatgcaaggtcgcatatgagCACATGGATGGCCGCACGAA | 208 |
EEE 9804c | 9804-9783 | aattctaatacgactcactatagggagaaggCAGCAAAGTAACGCCAGGAGTA | |
EEE 9619probe | 9619-9643 | GGTAGTCTATTACTACAACAGATAC | |
EEE RT-PCR | |||
EEE 5640 | 5640-5659 | CGGCAGCGGAATTTGACGAG | 433 |
EEE 6072C | 6047-6072 | ACTTTGACGGCCACTTCTGCTGATGA | |
EEE TaqMan | |||
EEE 9391 | 9391-9411 | ACACCGCACCCTGATTTTACA | 69 |
EEE 9459c | 9459-9439 | CTTCCAAGTGACCTGGTCGTC | |
EEE 9414probe | 9414-9434 | TGCACCCGGACCATCCGACCT | |
WEE NASBA | |||
WEE 9336 | 9336-9356 | gatgcaaggtcgcatatgagCGAGCAGACGCAACAGCAGAA | 233 |
WEE 9566C | 9566-9545 | aattctaatacgactcactatagggagaaggCAGGATAGCAAGAGCGACACCA | |
WEE 9390probe | 9390-9414 | GTGGGGCGAGAAGGGCTGGAGTACG | |
WEE RT-PCR | |||
WEE 5100 | 5100-5122 | GTTTGGCGGCGTCTCGTTCTCTA | 338 |
WEE 5437c | 5437-5414 | TCCGTGGTGCTGGTACTGGTCTGT | |
WEE TaqMan | |||
WEE 10,248 | 10,248-10,267 | CTGAAAGTCGGCCTGCGTAT | 67 |
WEE 10,314c | 10,314-10,295 | CGCCATTGACGAACGTATCC | |
WEE 10,271probe | 10,271-10,293 | ATACGGCAATACCACCGCGCACC |
NASBA forward primers have 5′ECL sequences (lowercase, italic); reverse primers have T7 promoter sequences (lowercase, italic).