TABLE 1.
Species and lane no.a | Origin | Strain designation | Alternative strain designation | ISFtu1 RFLP patternb
|
ISFtu2 RFLP pattern
|
||||
---|---|---|---|---|---|---|---|---|---|
PstI | Bg/II | SwaI | PstI | Bg/II | SwaI | ||||
F. tularensis subsp. tularensis | |||||||||
3 | Human ulcer, 1941, Ohio | FSC237 | Schu-S4 | 1 | I | i | A | a | α |
4 | Mite, 1998, Slovakia | FSC199 | SE-221-38 | 1 | I∗ | i | A | a | α |
5 | Human lymph node, 1920, Utah | ATCC 6223 | FSC230, B-38 | 2 | II | ii | B | b | β |
6 | Tick, 1935, British Columbia, Canada | FSC041 | Vavenby | 1∗ | I∗∗ | i | A | a | α |
F. tularensis subsp. holarctica | |||||||||
7 | Live vaccine strain, NDBR lot 11 | LVS | Live vaccine strain | 3 | III | iii | C | c | χ |
8 | Hare, Telemark, Norway, 1963 | FSC092 | HN63 | 3∗ | IV | iii | D | c | χ |
9 | Human lymph node, 1926, Japan | FSC017 | Jap-S2 | 4 | V | iv | E | d | δ |
10 | Ticks, 1957, Japan | FSC075 | Jama | 4 | V∗ | iv | E | d | δ |
11 | Beaver, 1976, Montana | FSC035 | B423A | 3∗ | IV | iii | D | c | χ |
12 | Human, 1998, Ljusdal, Sweden | FSC200 | 3∗ | III | iii | C∗ | c | χ | |
13 | Hare, 1952, France | FSC025 | Chateauroux | 3∗ | III∗ | iii | D | c | χ∗ |
14 | Human, 1981, Ljusdal, Sweden | FSC108 | R 45 | 3∗ | III | iii | C∗ | c | χ∗ |
15 | Human Blood, 1996, Raahe, Finland | FSC250 | 1532 | 3∗ | III | iii | C∗ | c | χ |
16 | Human Ulcer, 1984, Norway | FSC097 | 83933/84 | 3∗ | III | iii | C∗ | c | χ |
17 | Water, 1990, Odessa region, Ukraine | FSC124 | 14588 | 3∗ | III | iii | C∗ | c | χ |
F. tularensis subspecies mediaasiatica | |||||||||
18 | Miday gerbil, 1965, Central Asia | FSC147 | 543 | 5 | VI | v | F | e | ɛ |
19 | Tick, 1982, Central Asia, former USSR | FSC148 | 240 | 5∗ | VI | v | F | e | ɛ |
Identical RFLP patterns have each been designated the same arbitrary letter or number code; subtle differences (one or two bands) in an otherwise identical pattern are indicated by asterisks. The restriction enzymes used for digestion of genomic F. tularensis DNA were PstI, BglII, and SwaI.