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Journal of Clinical Microbiology logoLink to Journal of Clinical Microbiology
. 2003 Jan;41(1):528–529. doi: 10.1128/JCM.41.1.528-529.2003

Phylogenetic Analysis of Newcastle Disease Virus Genotypes Isolated in Japan

Masaji Mase 1, Kunitoshi Imai 1, Yasuyuki Sanada 1, Naoko Sanada 1, Noboru Yuasa 1, Tadao Imada 1, Kenji Tsukamoto 1, Shigeo Yamaguchi 1
PMCID: PMC149650

Volume 40, no. 10, p. 3826-3830, 2002. Page 3827: Table 1 should appear as shown on following page.

TABLE 1.

Phylogenetic examination of NDV isolates from Japan

Isolate Abbreviation Genotype Virulencea Cleavage site (112RRQKRF117)b DDBJ accession no.
APMV1/chicken/Japan/Sato/30 JP/Sato/30 III V — — — R — — AB070382
APMV1/chicken/Japan/Miyadera/51 JP/Miyadera/51 II V — — — — — — AB070383
APMV1/chicken/Japan/Sagamihara/53 JP/Sagamihara/53 II V — — — — — — AB070384
APMV1/chicken/Japan/Ishii/62 JP/Ishii/62 I L GK—G—L AB070385
APMV1/chicken/Japan/Narashino/68 JP/Narashino/68 VI V — — — — — — AB070386
APMV1/chicken/Japan/Chiba/69 JP/Chiba/69 VI V — — — — — — AB070387
APMV1/chicken/Japan/Chiba/81 JP/Chiba/81 VI V — — — — — — AB070388
APMV1/chicken/Japan/Chiba/84 JP/Chiba/84 VI V — — — — — — AB070389
APMV1/pigeon/Japan/FK-1/84 JP/FK-1-pg/84 VI M G — — — — — AB070390
APMV1/pigeon/Japan/Toyama/84 JP/Toyama/84 VI M G — — — — — AB070391
APMV1/pigeon/Japan/Ibaraki/84 JP/Ibaraki-pg/84 VI M G — — — — — AB070392
APMV1/pigeon/Japan/Nagano-8/84 JP/Nagano-8-pg/84 VI M G — — — — — AB070393
APMV1/chicken/Japan/TY-1/85 JP/TY-1/85 VI M — — — — — — AB070394
APMV1/pheasant/Japan/Gunma/85 JP/Gunma-ph/85 VII V — — — — — — AB070395
APMV1/chicken/Japan/Yamanashi/85 JP/Yamanashi/85 VII V — — — — — — AB070396
APMV1/chicken/Japan/Tochigi/85 JP/Tochigi/85 VI V — — — — — — AB070397
APMV1/pheasant/Japan/Tochigi/85 JP/Tochigi-ph/85 VI V — — — — — — AB070398
APMV1/chicken/Japan/Ibaraki/85 JP/Ibaraki/85 VI V — — — — — — AB070399
APMV1/chicken/Japan/Saitama/85 JP/Saitama/85 VII V — — — — — — AB070400
APMV1/chicken/Japan/Shizuoka/85 JP/Shizuoka/85 VII V — — — — — — AB070401
APMV1/chicken/Japan/Chiba/85 JP/Chiba/85 VII V — — — — — — AB070402
APMV1/chicken/Japan/Niigata/85 JP/Niigata/85 VII V — — — — — — AB070403
APMV1/chicken/Japan/Hyogo/85 JP/Hyogo/85 VII V — — — — — — AB070404
APMV1/chicken/Japan/Wakayama/85 JP/Wakayama/85 VII V — — — — — — AB070405
APMV1/chicken/Japan/Chiba/86 JP/Chiba/86 VII V — — — — — — AB070406
APMV1/pigeon/Japan/Tochigi/86 JP/Tochigi-pg/86 VI M W — — — — — AB070407
APMV1/chicken/Japan/Chiba/87 JP/Chiba/87 VII V — — — — — — AB070408
APMV1/pigeon/Japan/Niigata/88 JP/Niigata-pg/88 VI M G — — — — — AB070409
APMV1/chicken/Japan/Niigata/89 JP/Niigata/89 VII V — — — — — — AB070410
APMV1/chicken/Japan/Nara/89 JP/Nara/89 VII V — — — — — — AB070411
APMV1/pigeon/Japan/Kushiro/91 JP/Kushiro-pg/91 VI M G — — — — — AB070412
APMV1/pigeon/Japan/Tokachi/91 JP/Tokachi-pg/91 VI M G — — — — — AB070413
APMV1/chicken/Japan/Kagoshima/91 JP/Kagoshima/91 VIII V — — — — — — AB070414
APMV1/chicken/Japan/Okinawa/91 JP/Okinawa/91 VIII V — — — — — — AB070415
APMV1/pigeon/Japan/Ehime/93 JP/Ehime-pg/93 VI M G — — — — — AB070416
APMV1/pigeon/Japan/Kumamoto/95 JP/Kumamoto-pg/95 VI M G — — — — — AB070417
APMV1/chicken/Japan/MET/95 JP/MET/95 II L G——G— L AB070418
APMV1/pigeon/Japan/Tochigi/95 JP/Tochigi-pg/95 VI M — — K — — — AB070419
APMV1/pigeon/Japan/Utsunomiya/95 JP/Utsunomiya-pg/95 VI M — — K — — — AB070420
APMV1/chicken/Japan/Tokyo/96 JP/Tokyo/96 VII V — — — — — — AB070421
APMV1/pigeon/Japan/Shiga/96 JP/Shiga-pg/96 VI M — — K — — — AB070422
APMV1/pigeon/Japan/Fukushima/96 JP/Fukushima-pg/96 VI M — — K — — — AB070423
APMV1/pheasant/Japan/Ibaraki/97 JP/Ibaraki-ph/97 VII V — — — — — — AB070424
APMV1/parakeet/Japan/Chiba/97 JP/Chiba-pa/97 VI V — — — — — — AB070425
APMV1/pigeon/Japan/Saitama/97 JP/Saitama-pg/97 VI M — — K — — — AB070426
APMV1/chicken/Japan/Chiba-222/99 JP/Chiba-222/99 VII V — — — — — — AB070427
APMV1/chicken/Japan/Chiba-223/99 JP/Chiba-223/99 VII V — — — — — — AB070428
APMV1/chicken/Japan/Chiba-224/99 JP/Chiba-224/99 VII V — — — — — — AB070429
APMV1/chicken/Japan/Ibaraki-1/99 JP/Ibaraki-1/99 VII V — — — — — — AB070430
APMV1/chicken/Japan/Ibaraki-2/99 JP/Ibaraki-2/99 VII V — — — — — — AB070431
APMV1/chicken/Japan/Kanagawa/99 JP/Kanagawa/99 VII V — — — — — — AB070432
APMV1/chicken/Japan/Chiba/2000 JP/Chiba/2000 VII V — — — — — — AB070433
APMV1/pigeon/Japan/Gunma/2000 JP/Gunma-pg/2000 VI M — — K — — — AB070434
APMV1/chicken/Japan/Ibaraki/2000 JP/Ibaraki/2000 VII V — — — — — — AB070435
APMV1/chicken/Japan/Ibaraki-254/2001 JP/Ibaraki-254/2001 VII V — — — — — — AB070436
APMV1/chicken/Japan/Ibaraki-258/2001 JP/Ibaraki-258/2001 VII V — — — — — — AB070437
APMV1/chicken/Japan/Ibaraki-266/2001 JP/Ibaraki-266/2001 VII V — — — — — — AB070438
APMV1/quail/Japan/Chiba/2001 JP/Chiba-qa/2001 VII V — — — — — — AB070439
APMV1/chicken/Japan/Ibaraki-16/2001 JP/Ibaraki-16/2001 VII V — — — — — — AB070440
APMV1/chicken/Japan/Ibaraki-17/2001 JP/Ibaraki-17/2001 VII V — — — — — — AB070441
APMV1/chicken/Japan/Gunma/2001 JP/Gunma/2001 VII V — — — — — — AB070442
a

V, velogenic; M, mesogenic; L, lentogenic.

b

Genetic identity with consensus is marked with dashes.


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