TABLE 2.
Laboratory | RNA extraction protocol
|
No. of results
|
% Correctb | |||||
---|---|---|---|---|---|---|---|---|
Vol (μl) | Dilution of sample used | Concn of RNA by centrifugation at 4°C | Assay | Positive (n = 13) | Indeterminatea (n = 5) | Negative (n = 2) | ||
A | 200 | Undiluted | None | NucliSens | 13 | 3 | 2 | 100 |
B | 500 | Undiluted | None | NucliSens | 11 | 4 | 1 | 80 |
C | 100 | Undiluted | None | Nuclisens | 9 | 0 | 2 | 73.3 |
D | 250 | 1:1 | 21,000 × g for 1 h | Qiagen RNA | 13 | 1 | 2 | 100 |
E | 200 | Undiluted | None | Amplicor | 7 | 1 | 1 | 53.3 |
F | 140 | Undiluted | None | Qiagen RNA | 11 | 1 | 2 | 86.7 |
G | 200 | Undiluted | 23,000 × g for 1 h | Amplicor | 12 | 1 | 2 | 93.3 |
H | 200 | Undiluted | None | Amplicor | 9 | 1 | 0 | 60 |
I | 200 | 1:2 | 28,100 × g for 1 h | Amplicor | 12 | 3 | 2 | 93.3 |
J | 250 | 1:1 | 20,000 × g for 1 h | Qiagen RNA | 12 | 3 | 2 | 93.3 |
K | 200 | 1:2 | 24,000 × g for 1 h | Amplicor | 12 | 0 | 2 | 93.3 |
L | 200 | 1:1 | None | NucliSens | 10 | 0 | 2 | 80 |
Corresponds to the five samples listed in Table 1 with a viral load below the threshold of sensitivity of 50 IU/ml.
Taking into consideration the 13 positive and the 2 negative samples.