TABLE 1.
Identification, source, and restriction patterns of streptococcal strains studied for construction of database
Species | Strain no. | Designation in initial collection or other source | Restriction pattern
|
||
---|---|---|---|---|---|
HhaI | MboII | Sau3A | |||
S. agalactiae | HDP 89543T | CCUG 4208T | H-D1b | M-B1a | S-F1b |
HDP 96146 | CIP 104971 | H-D1a | M-B1b | S-F1a | |
HDP 98299 | CIP 105451 | H-D1a | M-B1a | S-F1a | |
CNRP 96/87 | Serotype Ia | H-D1a | M-B1a | S-F1a | |
CNRP 96/126 | Serotype Ia | H-D1b | M-B1a | S-F1a | |
CNRP 96/133 | Serotype V | H-D1c | M-B1a | S-F1a | |
CNRP 96/138 | Serotype III | H-D1b | M-B1a | S-F1a | |
CNRP 96/408 | Serotype V | H-D1c | M-B1a | S-F1b | |
CNRP 96/409 | Serotype Ia | H-D1b | M-B1a | S-F1a | |
CNRP 96/433 | Serotype V | H-D1c | M-B1a | S-F1b | |
S. alactolyticus | HDP 90057T | CIP 103244T | H-B4 | M-H1 | S-T1 |
S. anginosus | HDP 89578T | CIP 102921T | H-E3 | M-B5e | S-B1a |
HDP 89551 | R. Whiley, strain UC 7895 | H-F4a | M-B5b | S-B1a | |
HDP 92259 | R. Whiley, strain VR 348 | H-F4a | M-B5e | S-B1a | |
HDP 93171 | R. Whiley, strain KR 455 | H-F3 | M-B5a | S-B1b | |
HDP 93172 | R. Whiley, strain KR 687 | H-F3 | M-B5a | S-B1b | |
HDP 93173 | CDC 1007-77 | H-C1b | M-B5a | S-B1c | |
HDP 93174 | CDC 2236-81 | H-F4a | M-B5c | S-B1a | |
HDP 93179 | NCTC 8037 | H-C1a | M-B5c | S-B1c | |
HDP 93180 | ATCC 9895 | H-F4b | M-B5e | S-B1a | |
S. bovis | HDP 89505T | CIP 102302T | H-B3b | M-E2 | S-G1c |
S. canis | HDP 90051T | CIP 103223T | H-F1 | M-A3a | S-R1b |
HDP 99030 | CIP 105029 | H-F1 | M-A3a | S-R1b | |
S. caprinus | HDP 99204T | CIP 104887T | H-B3a | M-B7b | S-G2 |
S. constellatus | HDP 89579T | NCDO 2226T | H-E2b | M-A4b | S-L1a |
HDP 93154 | NCTC 5389 | H-E2a | M-A4a | S-L1b | |
HDP 93155 | NCTC 11063 | H-E2a | M-A5a | S-L1b | |
HDP 93156 | NCTC 10714 | H-E2a | M-A4c | S-L1b | |
S. criceti | HDP 89549T | A. Coykendall, strain H56 | H-G5 | M-F2 | S-U7 |
S. difficilis | HDP 98301T | CIP 103768T | H-D1b | M-B1 | S-F1a |
HDP 99031 | CIP 103853 | H-D1b | M-B1 | S-F1a | |
S. downei | HDP 90050T | CIP 103222T | H-G1 | M-F1 | S-U6 |
S. dysgalactiae subsp. dysgalactiae | HDP 89550T | CIP 102914T | H-F2 | M-A3a | S-R1a |
HDP 98005 | CIP 55.123 | H-F2 | M-A3a | S-R2 | |
HDP 98110 | CIP 55.119 | H-F2 | M-A3a | S-R2 | |
S. dysgalactiae subsp. equisimilis | HDP 98055 | CIP 105120, former type strain of S. equisimilis | H-F2 | M-A3a | S-R2 |
HDP 97340 | ATCC 35666 | H-F2 | M-A3a | S-R1b | |
HDP 98003 | CIP 104.339 | H-F2 | M-A3a | S-R2 | |
HDP 98004 | CIP 55.120 | H-F2 | M-A3a | S-R2 | |
HDP 99032 | CIP 103684 | H-F2 | M-A3a | S-R1b | |
HDP 99033 | CIP 105034 | H-F2 | M-A3a | S-R1b | |
S. equi subsp. equi | HDP 89501T | CIP 102910T | H-G7b | M-B6a | S-N1 |
HDP 99034 | CIP 105022 | H-G7b | M-B6a | S-N1 | |
HDP 99035 | CIP 105023 | H-G7b | M-B6a | S-N1 | |
S. equi subsp. zooepidemicus | HDP 90053 | CIP 103228, former type strain of S. zooepidemicus | H-G7a | M-B6c | S-E1a |
HDP 98092 | CIP 52.209 | H-G7d | M-B6a | S-E1b | |
HDP 98093 | CIP A7 | H-G7d | M-B6b | S-E1b | |
HDP 98297 | CIP 105025 | H-G7c | M-B6b | S-E1b | |
HDP 99036 | CIP 105024 | H-G7c | M-B6a | S-E1b | |
S. equinus | HDP 89506T | CIP 102504T | H-B3b | M-E2 | S-G1b |
HDP 99309 | API 78.04.058, NCTC 10389 | H-B3b | M-E2 | S-G1a | |
HDP 99313 | API 88.07.126 | H-B3b | M-E2 | S-G1b | |
S. ferus | HDP 89545T | A. Coykendall, strain 8S1 | H-G6 | M-G5 | S-O1/PICK> |
S. gallolyticus | HDP 98035T | ACM 36.11T | H-B3c | M-B7b | S-G1a |
HDP 90055 | NCDO 2019 | H-B3b | M-B7a | S-G1a | |
HDP 90299 | API 84.03.028 | H-B3b | M-B7a | S-G3 | |
HDP 98354 | CDC 3437-70 | H-B3b | M-B7a | S-G1a | |
S. gordonii | HDP 89552T | API 91.01.022, NCTC 7865T | H-B2a | M-G1a | S-H1a |
HDP 84022 | API 77.09.010, NCTC 10231 | H-B2b | M-G1a | S-H1a | |
HDP 89542 | CCUG 18374 | H-B2a | M-G1b | S-H1a | |
HDP 99101 | CIP 103221 | H-B2a | M-G1a | S-H1a | |
HDP 99285 | CIP 55.121 | H-B2a | M-G1a | S-H1b | |
HDP 99287 | CIP 102337 (received as Streptococcus sp.) | H-B2a | M-G1a | S-H1c | |
S. infantarius subsp. infantarius | HDP 90056T | NCDO 599T, CIP 103233T | H-B1 | M-E1a | S-G1b |
HDP 90104 | Our collection, dairy product | H-B1 | M-E1c | S-G1b | |
S. infantarius subsp. coli | HDP 90246 | NCDO 964 | H-B1 | M-E1b | S-G1b |
HDP 90247 | NCDO 2602 | H-B1 | M-E1d | S-G1b | |
HDP 90248 | NCDO 2620 | H-B1 | M-E1d | S-G1b | |
S. intermedius | HDP 93161T | NCDO 2227T | H-E1b | M-B3 | S-C2 |
HDP 99286 | CIP 105038 (received as S. gordonii) | H-E1a | M-B3 | S-C2 | |
HDP 93162 | CDC 415-87 | H-E1a | M-B3 | S-C2 | |
HDP 93167 | A. Coykendall, strain AC 6425 | E2c/E1a | M-A5b | S-C2 | |
S. intestinalis | HDP 90052T | CIP 103224T | H-B4 | M-H1 | S-T1 |
S. macacae | HDP 89541T | CIP 102912T | H-D4 | M-F3 | S-U8 |
S. mitis | HDP 99284T | CIP 103335T, neo-type strain | H-A5c | M-B2c | S-A1d |
HDP 84001 | API 78.04.067, NCTC 3168 | H-A1b | M-B2a | S-A2b | |
HDP 84002 | CIP 103216 (received as S. sanguis biotype II) | H-A2a | M-B2b | S-A3 | |
HDP 84009 | NCTC 10712 (received as S. sanguis biotype II) | H-A2b | M-G6 | S-A3 | |
HDP 84010 | API 78.11.144, ATCC 10232 | H-A3a | M-F7 | S-A2a | |
HDP 89503 | R. Facklam, strain SS-429 | H-A1b | M-B2b | S-A1d | |
HDP 89609 | API 78.07.063 (received as S. sanguis biotype II) | H-A2a | M-E3c | S-A3 | |
S. mutans | HDP 89502T | NCTC 10449T | H-G4 | M-G3 | S-I1a |
HDP 97299 | ATCC 35668 | H-G4 | M-G3 | S-I1b | |
S. oralis | HDP 89546T | CIP 102922T | H-A5a | M-E3a | S-A1a |
HDP 89527 | NY SBE-844 | H-A2a | M-B2b | S-A1b | |
HDP 89535 | A. Coykendall, strain AC 9811 | H-A2a | M-E3e | S-A1a | |
HDP 89537 | A. Coykendall, strain OS51 | H-A5b | M-E3b | S-A1c | |
S. parasanguinis | HDP 99102T | CIP 104372T | H-C1c | M-G1c | S-U5 |
S. parauberis | HDP 98049T | CIP 103956T | H-D5a | M-D2 | S-M1 |
HDP 90054 | NCDO 2018 | H-D5a | M-D2 | S-M1 | |
HDP 98385 | NCDO 2056 | H-D5a | M-D2 | S-M1 | |
HDP 98401 | NCDO 642 | H-D5a | M-D2 | S-M1 | |
HDP 98402 | NCDO 648 | H-D5a? | M-D2 | S-M1 | |
HDP 98403 | NCDO 649 | H-D5a? | M-D2 | S-M1 | |
HDP 98404 | NCDO 650 | H-D5a? | M-D2 | S-M1 | |
HDP 98405 | NCDO 689 | H-D5a? | M-D2 | S-M1 | |
HDP 99184 | CIP 105803 | H-D5a | M-D2 | S-M1 | |
S. pneumoniae | HDP 89540T | CIP 102911T | H-A3a | M-G2a | S-A1g |
CNRP 70131 | P. Geslin, serotype 23F | H-A4b | M-G2c | S-U4 | |
CNRP 70133 | P. Geslin, serotype 23F | H-A4a | M-G2c | S-U3 | |
CNRP 70203 | P. Geslin, serotype 23F | H-A3a | M-C1c | S-V2 | |
CNRP 70247 | P. Geslin, serotype 19F | H-A3a | M-C1b | S-A1f | |
CNRP 70265 | P. Geslin, serotype 19F | H-A4a | M-G2b | S-A2a | |
CNRP 70305 | P. Geslin, serotype 19F | H-A4a | M-G2b | S-A2b | |
CNRP 70350 | P. Geslin, serotype 9V | H-A3a | M-C1a | S-A1e | |
HDP 98040 | ATCC 6301, serotype 1 | H-A2b | M-G2a | S-A1c | |
Strain R6 | Nontypeable strain | H-A4c | M-G2a | S-A2c | |
S. porcinus | HDP 90049T | CIP 103218T | H-H2 | M-A1 | S-K1a |
HDP 98090 | CIP 104385, serogroup U | H-H2 | M-A1 | S-K1b | |
HDP 98112 | CIP 104338, serogroup P | H-H2 | M-A1 | S-K2 | |
HDP 98089 | CIP 104384, serogroup E | H-H2 | M-A1 | S-K1b | |
HDP 98111 | CIP 104386, serogroup V | H-H2 | M-A1 | S-K1b | |
HDP 98149 | CIP 104389 | H-H2 | M-A1 | S-K1a | |
HDP 98150 | CIP 104388 | H-H2 | M-A1 | S-K1a | |
HDP 98151 | CIP 104387 | H-H2 | M-A1 | S-K1a | |
S. pyogenes | HDP 89539T | P. Kriz, CIP 56.41T, biotype 1, serotype M1 | H-H1b | M-A2a | S-Q1a |
HDP 93104 | P. Kriz, PHLS SF130/13, biotype 1, serotype M1 | H-H1b | M-A2a | S-Q2 | |
HDP 93106 | P. Kriz, PZH GH1/Richard 55P serotype M3 | H-H1b | M-A2a | S-Q2 | |
HDP 93109 | P. Kriz, RU T11/137/1, serotype M11 | H-H1b | M-A2c | S-Q1b | |
HDP 93110 | P. Kriz, 63595-H1, serotype M12 | H-H1d | M-A2a | S-Q2 | |
HDP 93112 | P. Kriz, NCTC 11/64, serotype M48 | H-H1d | M-A2b | S-Q2 | |
HDP 98001 | Our collection, biotype 3 | H-H1b | M-A2b | S-Q2 | |
HDP 98052 | Our collection, biotype 3 | H-H1c | M-A2a | S-Q3 | |
HDP 98139 | Our collection, biotype 3 | H-H1a | M-A2a | S-Q3 | |
HDP 98173 | Our collection, biotype 3 | H-H1b | M-A2a | S-Q3 | |
HDP 98353 | Our collection, biotype 5 | H-H1a | M-A2a | S-Q3 | |
HDP 98359 | Our collection, biotype 3 | H-H1a | M-A2a | S-Q3 | |
HDP 98384 | Our collection, biotype 3 | H-H1a | M-A2a | S-Q3 | |
S. ratti | HDP 89575T | ATCC 19645T | H-G3a | M-G4a | S-U1 |
HDP 99416 | CIP 74.15 | H-G3b | M-G4b | S-U2 | |
S. salivarius | HDP 89532T | CIP 102503T | H-C2 | M-E3f | S-J1 |
S. sanguinis | HDP 84025T | API 77.09.011, NCTC 7863T | H-F5 | M-E4 | S-C1a |
HDP 93177 | CDC 2405-81 | H-C1a | M-D3 | S-C1b | |
HDP 99283 | CIP 103.231 | H-A1a | M-B2b | S-V1 | |
S. sobrinus | HDP 89577T | A. Coykendall, strain SL1 | H-D3 | M-F4 | S-O1 |
HDP 99417 | CIP 74.16 | H-G2 | M-A5b | S-U9 | |
S. suis | HDP 90048T | CIP 103217T | H-D2 | M-D1a | S-P1 |
S. thermophilus | HDP89530T | CIP 102303T | H-C2 | M-F5 | S-J1 |
S. uberis | HDP 89504T | CCUG 17930T | H-E3 | M-B4 | S-D1a |
HDP 98091 | CIP 101889 | H-E3 | M-B4 | S-D1b | |
HDP 98406 | NCDO 640 | H-E3 | M-B4 | S-D1a | |
HDP 98407 | NCDO 643 | H-E3 | M-B4 | S-D1b | |
HDP 98408 | NCDO 658 | H-E3 | M-B4 | S-D1a | |
HDP 98409 | NCDO 1513 | H-E3 | M-B4 | S-D1b | |
HDP 98410 | NCDO 2022 | H-E3 | M-B4 | S-D1b | |
HDP 99182 | CIP 105801 | H-E3 | M-B4 | S-D1a | |
HDP 99183 | CIP 105802 | H-E3 | M-B4 | S-D1a | |
S. vestibularis | HDP 90069T | CIP 103363T | H-C2 | M-E3d | S-J1 |