Table 2.
Basic features of the S. strix introns. Characteristics of 21 introns found in 17 Streblomastix genes analysed. Size and base composition are shown. GC% mRNA shows base composition of the coding sequence (excluding introns).
Protien name | Intron | Size(bp) | %GC(Intron) | %GC(coding) |
RPS9 | 1 | 57 | 0.29 | 0.46 |
2 | 88 | 0.38 | ||
3 | 57 | 0.3 | ||
RPL18 | 1 | 60 | 0.25 | 0.49 |
RPL21 | 1 | 46 | 0.11 | 0.37 |
2 | 66 | 0.09 | ||
Cathespin B (1) | 1 | 122 | 0.16 | 0.35 |
Cathespin B (2) | 1 | 63 | 0.22 | 0.47 |
2 | 66 | 0.18 | ||
3 | 91 | 0.15 | ||
Glutamate Dehydrogenase | 1 | 100 | 0.36 | 0.38 |
Pyruvate phosphate dikinase (1) | 1 | 229 | 0.21 | 0.44 |
UAP56/BAT1 | 1 | 105 | 0.22 | 0.37 |
2 | 168 | 0.15 | ||
Nuclear transport factor 2 | 1 | 56 | 0.27 | 0.41 |
2 | 58 | 0.2 | ||
Conserved hypothetical | 1 | 64 | 0.27 | 0.44 |
2 | 61 | 0.31 | ||
3 | 102 | 0.23 | ||
4 | 54 | 0.3 | ||
5 | 69 | 0.22 | ||
Average | 85 | 0.23 | 0.42 |