TABLE 1.
Elucidated fusion protein amino acid cleavage site sequences of the APMV1 cormorant isolates, with the GenBank accession numbersa
| Isolate identification (reference) | ICPI (8 days) | IVPI (10 days) | Fusion protein cleavage site (molecular pathotyping) | GenBank accession no. |
|---|---|---|---|---|
| APMV1/CT/Sask/1479/90 (8) | 1.55 | 2.08 | SGGRRQKR*FVG | AF448223 |
| APMV1/CT/Sask/2585/92 (8) | 1.6 | 1 | SRGRRQKR*FVG | AF448844 |
| APMV1/CT/Man/3298/92 | 1.3 | 0.8 | SRGRRQKR*FVG | AF448843 |
| APMV1/CT/Ont/2150/95 | 1.6 | 1.2 | SRGRRQKR*FVG | AF448486 |
| APMV1/CT/Ont/2344/95 | 1.71 | 0.89 | SRGRRQKR*FVG | AF448486 |
| APMV1/CT/Ont/2575/95 | 1.88 | 0.12 | SRGRRQKR*FVG | AY063493 |
| APMV1/CT/Sask/2035/95 (12) | 1.61 | 1.23 | SRGRRQKR*FVG, nonhemagglutinating | AF448845 |
| APMV1/CT/Ont/39/96 | 1.15 | 0.86 | SRGRRQKR*FVG | AF448842 |
| APMV1/CT/Ont/48/96 | 1.66 | 1.41 | SRGRRQKR*FVG | AY063492 |
| APMV1/CT/Sask/3-1125/98 | 1.56 | 1.09 | SRGRRQKR*FVG, nonhemagglutinating | AY063494 |
| APMV1/CT/Alb/35/99 (4) | 1.07 | 0.41 | SRGRRQKR*FVG, nonhemagglutinating | AF448841 |
| APMV1/CT/Sask/45/99 | SRGRRQKR*FVG | AF263615 | ||
| APMV1/CT/Ont/378/00 | 1.3 | 1.64 | SRGRRQKR*FVG, nonhemagglutinating | AY063123 |
| APMV1/CT/Ont/429/00 | ND | ND | SRGRRQKR*FVG | AY063123 |
| APMV1/CT/Ont/410/00 | ND | ND | SRGRRQKR*FVG, nonhemagglutinating | AY063123 |
a
CT, cormorant. In ICPI the most virulent APMV1 isolates give indices close to 2, in IVPI the most virulent APMV1 isolates give indices close to 3, and in both ICPI and IVPI the avirulent viruses give values close to 0. ND, not done.