Characterization of the purified AP-3. Ten
micrograms of the purified AP-3 material and 35 μg of purified rat
brain CCVs were boiled in 50 μl of 1× SDS sample buffer. Thirty-five
microliters of each sample was loaded onto a 6–15% gradient gel for
Coomassie blue staining, and 5 μl of each sample was loaded in
triplicate on the same gel for subsequent
immunoblotting with different antibodies. The Coomassie
blue staining indicates that the purified AP-3 fraction has only three
major bands, labeled AP-3δ, AP-3β, and AP-3μ (upper left panel).
Because AP-3δ and the clathrin heavy chain (CHC) comigrate in this
gel system, they were identified by immunoblotting. The
anti-AP-3δ antibody detected only AP-3δ in the AP-3 fraction (upper
right panel, top), whereas the anti-CHC antibody detected only the CHC
in the CCV fraction (lower left panel, top). The AP-3ς subunit was
not visible by Coomassie blue staining but was clearly detected by
immunoblotting with anti-AP-3ς antibody (upper right
panel, bottom). Immunoblotting with anti-AP-1 and
anti-AP-2 antibodies demonstrated that these adaptors were undetectable
in the purified AP-3 fraction (lower left and right panels). The lower
molecular weight bands seen in the CHC and AP-3δ blots most likely
represent degradation products of these proteins.