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. 2001 Dec 7;3(1):research0001.1–research0001.17. doi: 10.1186/gb-2001-3-1-research0001

Table 4.

Consensus residues distinguishing AQPs and GLP proteins

Consensus position* P1 after H3 P2 at NPA-LB P3 after H5 P4 at NPA-LE P5 at NPA-LE NPA-LB NPA-LE
AQP-type T/Q/M/E/V/A S/A A Y/F W
GLP-type Y/F D R/K P/A I/V/L/M/A/W
Arabidopsis AQP family
PIP Q S A F W NPA NPA
TIP T/V S/A A Y W NPA NPA
NIP F/Y S/T A Y I/L/M NPA/S NPA/G/V
SIP I/F A/V A Y W NPT/C/L NPA
Character†
AQP-like PIP, TIP PIP, TIP, NIP, SIP PIP, TIP, NIP, SIP PIP, TIP, NIP, SIP PIP, TIP, SIP
GLP-like NIP, SIP - - - NIP

H, transmembrane domain. NPA-LB/NPA-LE, first and second NPA motif, respectively. P1-P5, conserved residues that may distinguish functions. *According to [58]. †Most Arabidopsis sequences resemble true AQPs; subfamily NIP shows some characteristics of glycerol facilitators.