Table 2.
Minor allele frequencies of the 23 SNPs detected in the PI3 gene.
Location | ||||||
GenBank entry positiona | ntb | region | Non-synonymous substitution | MAF | rs number | MAF in dbSNP |
48460A>G | -1077 | promoter | 0.107 | |||
48470A>G | -1067 | promoter | 0.107 | |||
48474G>A | -1063 | promoter | 0.121 | |||
48577T>Del | -960 | promoter | 0.103 | |||
48626G>A | -911 | promoter | 0.009 | |||
48669C>G | -868 | promoter | 0.138 | 2267863 | ||
48848C>G | -689 | promoter | 0.107 | |||
48862C>T | -675 | promoter | 0.107 | |||
49084T>G | -453 | promoter | 0.005 | |||
49199G>A | -338 | promoter | 0.107 | |||
49279A>G | -258 | promoter | 0.005 | |||
49586C>T | +50 | exon 1 | T17M | 0.107 | 17333103 | 0.169 |
49681C>A | +145 | IVS 1 | 0.107 | 17333180 | 0.169 | |
49698T>A | +162 | IVS 1 | 0.455 | 1983649 | 0.471 | |
49940C>G | +404 | IVS 1 | 0.083c | |||
49944C>T | +408 | IVS 1 | 0.125c | |||
50105C>G | +569 | IVS 1 | 0.146c | 16989785 | 0.056 | |
50163A>G | +627 | IVS 1 | 0.146c | 17424356 | 0.169 | |
50287T>A | +751 | IVS 1 | 0.063c | 6032040 | 0.176 | |
50495A>C | +959 | exon 2 | T34P | 0.125c | 2664581 | 0.156 |
50659C>T | +1123 | exon 2 | 0.020c | |||
50762C>A | +1226 | IVS 2 | 0.125c | |||
50770C>A | +1234 | IVS 2 | 0.125c | 17424474 | 0.152 |
aGenBank accession No. AL049767.12.
bLocation is with respect to translation start site.
cFrequency estimated from 24 unrelated individuals.