Table 2.
Five examples of genomic difference from three categories: Bp-specific; Bt-specific and Bp-Bt divergent. Genes associated with genomic islands are not included in this table
| Bp-specific genes | Bt-specific genes | Bp-Bt divergent genes | |||||||||||||
| Bp genes | Functional notes | Size (Kb) | GC (%) | Bt genes | Functional notes | Size (Kb) | GC (%) | Bt genes | Functional notes of Bt gene | Size (Kb) | GC (%) | Bp genes | Functional notes of Bp gene | Size (Kb) | GC (%) |
| BPSS0995- | Secondary metabolites | 69 | 71.7 | BTH_II1662- | Polyketide biosynthesi | 89 | 73 | BTH_I2687- | Transposase; unknown | 12.6 | 57.4 | BPSL2036- | Unknown function | 6.5 | 55.4 |
| BPSS1011 | biosynthesis; lipid transport and metabolism genes | BTH_II1682 | s proteins+ | BTH_I2692 | proteins | BPSL2040 | genes | ||||||||
| BPSS2210- | Miscellaneous clusters, | 60 | 71.8 | BTH_II0143- | Flagella system, | 58 | 65 | BTH_II1612- | Miscellaneous clusters, | 12.4 | 66 | BPSS0779- | Miscellaneous clusters, | 11.2 | 70.9 |
| BPSS2263 | including lipopolysaccharides biosynthesis genes; signal transduction mechanisms genes; etc. | BTH_II0197 | chemotaxis-assoicated proteins+ | BTH_II1622 | including Energy production and conversion genes; transcriptional regulators etc. | BPSS0784 | including Secondary metabolites biosynthesis; energy production and conversion genes | ||||||||
| BPSS1632 | Probable non-ribosomal | 53 | 67.1 | BTH_II0913- | Miscellaneous clusters | 45.2 | 69 | BTH_II0079- | Transposase | 9.8 | 69.1 | BPSS0068- | Transposase; regulator | 8.1 | 65.1 |
| BPSS1640 | peptide synthetase (NRPS) cluster | BTH_II0943 | BTH_II0083 | BPSS0074 | protein | ||||||||||
| BPSS1375- | Type III systems 1 | 47 | 64.3 | BTH_II0054- | RND multi-drug efflux | 28.4 | 65 | BTH_I1328- | GDP-D-rhamnose | 9.7 | 66.2 | BPSL2793- | Capsule biosynthesis | 13.9 | 57.1 |
| BPSS1412 | (TTS1)* | BTH_II0072 | proteins | BTH_I1335 | biosynthesis+ | BPSL2806 | proteins* | ||||||||
| BPSL2848- | Phosphonate utilization | 12 | 70.9 | BTH_II1626- | L-arabinose assimilation | 10.4 | 71 | BTH_II0431- | Transposase | 6.8 | 62.4 | BPSS1940- | Signal transduction; | 4.4 | 69.4 |
| BPSL2860 | operon+ | BTH_II1633 | operon * | BTH_II0436 | BPSS1941 | chemotaxis | |||||||||
* genes associated with this functional difference have been reported.
+ genes associated with this functional difference are firstly reported